Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq88 132 6e-26
>seq88
Length=95151
Score = 132 bits (146), Expect = 6e-26
Identities = 329/496 (66%), Gaps = 5/496 (1%)
Strand=Plus/Plus
Query 154627 TACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACC 154686
|||| |||||| | || | || || |||| ||| || || || ||||| || |
Sbjct 53725 TACAGCCTAACTCTGGTGCCCAAGGAGAGTTTGCTGGTCTTCGTGCTATCCACCGCTATC 53784
Query 154687 ATCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAA 154746
|| | | | |||| | ||| | || | |||||||| || | || || |||||||
Sbjct 53785 ATGAGGAAAATGGAGGCAAGAAACGTGATATCTGTTTGATTCCTGTCTCTGCCCATGGAA 53844
Query 154747 CTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGAT---G 154803
| || ||||| |||| ||||||||| ||| ||||| | |||||||||||
Sbjct 53845 CCAACCCTGCCTCGGCTGCCATGGCAGGTATGCGTGTTGTTCCTATCAAGTGTGATACCA 53904
Query 154804 ATGATGGTAACATAGACATCAAAGATCTAGAGAAGAA-AGCAATCATGAATACATTTGAA 154862
| ||| ||| | || ||| ||||| ||| || |||| | | || | ||||
Sbjct 53905 CTACTGGAAACTTGGATATCGCTGATCTGGAGGCCAAGTGCAA-AAAGCATGCTGATGAA 53963
Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGA 154922
|| || || ||||| || ||||| ||| |||| | |||||| || || | ||
Sbjct 53964 CTTGGCTGCATCATGATCACTTACCCTAGTACTTTTGGTATCTTTGAACCTGACGTCCGA 54023
Query 154923 CAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTA 154982
|| ||| | | || |||| | ||||| ||||| || | || || || || |
Sbjct 54024 AAGGCCTGTGATCTTGTGCATGCTTACGGTGGCCAGGTGTACATGGACGGCGCCAACATG 54083
Query 154983 AATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAAC 155042
||||| ||| | || || | || ||||| ||| || ||||| || || | |||
Sbjct 54084 AATGCCCAGATTGGTCTTACCTCTCCTGGTGAGATTGGCGCTGATGTGTGCCACTTGAAC 54143
Query 155043 TTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGT 155102
| ||||| |||||||| ||||| ||||| ||||| || ||||| || |||||||| ||
Sbjct 54144 CTGCATAAGACATTCTGCATTCCTCATGGCGGTGGTGGCCCTGGTGTCGGTCCTATCTGT 54203
Query 155103 GTAGCAAAACATCTCA 155118
|| ||||||||||
Sbjct 54204 GTCAAGAAACATCTCA 54219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579205704643200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |