Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq105 199 7e-46 seq116 192 1e-43 >seq105 Length=86313 Score = 199 bits (220), Expect = 7e-46 Identities = 560/850 (66%), Gaps = 26/850 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | |||||||||||||| ||||| || | | |||||||||||| Sbjct 44898 CTGGTAGTCGCCGACACGCTTCTCAAAGAAGTTAGTCTTGCCGCCGAGCGAGATGTTCTC 44839 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTA---TACACCCGTGTCAG-GCCCATCTGTTCCA 47954 ||||||| ||||||||| |||| | |||||| | || ||| | | | Sbjct 44838 CATGAAGTCGAAGGGGTT---TGTGGCACGGTACACCT-TCTCGTTGCCTAGAGCAACAA 44783 Query 47955 GCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014 ||||| | || || || |||| ||||| | ||| || |||||| |||| | Sbjct 44782 GCAGGCGGTCAGCAACAAACTCAATGTACTGCTTCATCAGATCAGCGTTCATTCCTAGCA 44723 Query 48015 GGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074 | ||||| ||||| || || ||||||||||| ||| ||||| || | | Sbjct 44722 GACCGCAGGGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCAGTGATGA 44663 Query 48075 TCTGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131 ||| | || || || ||| || | ||||| ||| ||| | | |||| || Sbjct 44662 TCTTTTGCACAAGGTCCTTGCTGGGGCGGTTGTT---CAGATGCGAGA---ACAGCAGGC 44609 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | |||||||| |||||| ||| || || || || ||| |||| |||||| |||| Sbjct 44608 AAGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGAC 44549 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 ||||||||| || | || ||||||||| || | ||||| | ||| ||||| |||| Sbjct 44548 CAGGCATGAGACCACGCTTGCGGAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGA 44489 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 ||||||| || || || || || || | || | || | | | |||||| | || Sbjct 44488 TGCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTCGACTCCTTGTCGGTGA 44429 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGA 48371 |||| || |||||||| ||||| |||||| || || || || ||||| || Sbjct 44428 TCCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGA 44369 Query 48372 AGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACA 48428 | || | ||| || | ||| | ||||| | | |||||| | ||| Sbjct 44368 ACAGGTATGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGC---GAGTAGG 44312 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 | |||||||| | || || || ||||||||| ||||||||| | |||||| | Sbjct 44311 TTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGA 44252 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 |||||| || ||||| | ||| | ||||| || ||||| || ||||| || |||| Sbjct 44251 TCTGCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAG 44192 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA---GCATTCC 48605 ||||||||||||| | || | ||| | |||||| | | | ||| |||| Sbjct 44191 CAAAGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCC 44132 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | || || ||| || | || || ||||||||||||| || || | Sbjct 44131 AGTCGTGGAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAGAAGGAGGCCTCGGCCT 44072 Query 48666 TTTTGTACAT 48675 | |||||||| Sbjct 44071 TCTTGTACAT 44062 >seq116 Length=83673 Score = 192 bits (212), Expect = 1e-43 Identities = 825/1279 (65%), Gaps = 55/1279 (4%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| || || | || || | | |||||||| ||| || |||||| Sbjct 75604 GGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAG 75663 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 || |||| || ||| ||||| ||||||||||| | ||||||||||| |||||||| || Sbjct 75664 GGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCA 75723 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC-GAAGCTCTGCCCAGTC 213085 || || ||| || | || || |||| || | | || || | |||||| Sbjct 75724 ACTAGAAGAGAATTGCGTACACCATGCT-GCTTAATCTTCTCCTTTAGAGAAGTCCAGTC 75782 Query 213086 CCATCTGCCAGA-CAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 ||| |||| || || | |||| | |||||| ||||||||||||||||||| Sbjct 75783 CCA-----CAGATCA----CTAG-GAGTCACATCCCACATATCAAACTGCAAGATGCCTT 75832 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 | || || |||| |||| ||||| | || | | || ||| | || | Sbjct 75833 GGGAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTG 75892 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | || || || |||| ||||||||||||||| |||| | ||||||||| || | Sbjct 75893 AAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTT 75952 Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 | ||||| || ||||| | |||| | |||||||| ||||| || |||| Sbjct 75953 CAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGA 76012 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTG 213383 || ||||| | ||| | || ||| ||| |||| |||| | ||||| || Sbjct 76013 CACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGC-TTCCTGGACAGGGTAGTGATTC 76071 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 |||||||| ||| |||||||| | |||| |||||| | | ||| Sbjct 76072 ACATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTT----CGTGTA--GC 76125 Query 213444 TGATTGAACACGTAGCCCCC------GTCCTGCACAAACTCAGGCAGGGC----GATGCT 213493 | || || | || | || || | ||| || ||| ||||| |||||| Sbjct 76126 TTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCTAGAGATGCT 76185 Query 213494 GGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAG 213553 |||||||| || || ||||| | || | | |||||| || ||||| |||||||| Sbjct 76186 ----AGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAG 76241 Query 213554 GTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCT 213612 ||| | || ||||| || || || | | | ||| ||||| | |||| || | Sbjct 76242 GTTCGAACTGCGAATGGTACCTAGATTTTTCT-GATTGCTCTTGCGGTTGCAGTGGTCTT 76300 Query 213613 TGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAG 213670 |||||||||| | ||| || ||||| ||| | | |||| | |||| ||| || Sbjct 76301 TGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAA--TGGCATACCACAG 76358 Query 213671 GTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAG 213730 | | ||||||||| ||| | ||| || | | | |||||||| ||| || || Sbjct 76359 TTTCTGGGCCTTGACAACCATGC-GACCGCGACCCTCCT--TCTCGTACTTTTCATACAG 76415 Query 213731 CTCGTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGA 213789 | | || || | ||| || | | | ||| || || || ||| ||||||| Sbjct 76416 AGCCTCAAACTCTTCGCCATAGCAATCCG-CCAAGCCGGGGCATTCATTGGGGCACATGA 76474 Query 213790 GGCTCCAGTCC-CCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848 | |||||||| | || |||| || | || |||||||| ||| || |||||| || Sbjct 76475 GAGTCCAGTCCTCATTCTTCTC-AACACGCTTCATGAACAAGTCGCAGATCCACAGGGCC 76533 Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908 ||| ||||| | | | || ||| ||| ||| ||||| | || || || Sbjct 76534 AAGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAAC 76593 Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG--- 213965 || |||| || || ||||| ||||| | || ||||||||||| || || | |||| Sbjct 76594 TCGAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTT 76653 Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025 || |||||||| || | ||| ||||||| | || || | ||| || | ||| Sbjct 76654 CCACCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCG 76713 Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTCATGG 214083 || || ||||| || || || || || ||||| | ||| | | | || ||| | Sbjct 76714 TTCGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTG 76773 Query 214084 AGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGA 214143 ||| || || ||||| || |||||| |||||||| || | | | || || | Sbjct 76774 AGA--CCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAA 76831 Query 214144 TGCCGGCCATGCTGTCATC 214162 |||| | ||||||||||| Sbjct 76832 TGCCCTCGATGCTGTCATC 76850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931521388723200