Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq105 237 3e-57 seq116 163 5e-35 >seq105 Length=86313 Score = 237 bits (262), Expect = 3e-57 Identities = 575/859 (67%), Gaps = 28/859 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | ||| |||||| || || |||||||||||| Sbjct 44053 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCTGAGGAGATTGATCTG 44112 Query 25537 GCCAAGGACATGGACGGCTGGTACGC---TCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 | ||||| | ||| |||| || ||| ||||||||||||| | || || Sbjct 44113 TCTAAGGATCTCCACGACTGGAACAACCGTCTGAACAAAGACGAGCAGTACTTCATCTCC 44172 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || |||||||| ||||||||||| || || ||||| ||||| ||| | Sbjct 44173 CACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATCGTCAACGAAAATCTCGTTGAGCGC 44232 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 ||| | | || |||||| | |||||| || ||||||||||||||||| || Sbjct 44233 TTCTCAGGCGAGGTGCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGATG 44292 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTA--CAGACG 25768 ||||| | |||||||| || | ||| ||||| || ||||| | || | Sbjct 44293 GAAAACATCCACTCTGAAACCTA---CTCGCTGCTGATTGACACCTACATCAAGGAGCCC 44349 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAG 25827 |||| | | | || ||||| |||||| || ||| || ||| ||||| | ||| Sbjct 44350 TCGCAGCG-CACAT-ACCTGTTCAATGCCATTGA-CACTATTCCCTGCATCCGCCGCAAG 44406 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTA 25887 || ||||| |||||||||||| | | || | ||||||| | |||| || || Sbjct 44407 GCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTCGACGTTTGCCCAGCGCCTAGTT 44466 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 |||||||||||||| ||||||||||||||| || | || || |||||||||||||| Sbjct 44467 GCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGGCGCCTTCGCCTCCATCTTCTGGCTC 44526 Query 25948 AAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 ||| | || | |||||| || ||| ||| || |||||||| || | || || Sbjct 44527 -CGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAACGAGCTTATTTCTCGTGATGA 44585 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC 26066 ||| || |||| || ||||| |||||||| | | || || || | || || Sbjct 44586 GGGCCTGCACACCGACTTTGCTTGCCTGCTGTTCTCG---CATCTGAACAAC-CGCCCCA 44641 Query 26067 TCAAGAGACC--GTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNN 26124 |||| |||| || | | ||||||| || || || | ||||||||||||||| | Sbjct 44642 GCAAG-GACCTTGTGCAAAAGATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTCCTG 44700 Query 26125 NNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATACAT 26183 | || |||||| | || || |||| || ||||| Sbjct 44701 ACCGAGGCTCTGCCCTGCGGTCTGCTAGGAATGAAC-GCTGATCTGATGAAGCAGTACAT 44759 Query 26184 TGAGTATGTGGCCGACCATCTGC-TGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGC 26242 ||||| ||| || |||| |||| ||| | || || || | | ||| || | Sbjct 44760 TGAGTTTGTTGCTGACCGCCTGCTTGTTGC-TCTAGGCAACGAGAAGGTGTACCGTGCCA 44818 Query 26243 CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAA 26302 | ||||| |||||||| ||||| ||||| ||| | | || ||||| ||||||||||| | Sbjct 44819 CAAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACTAACTTCTTTGAGA 44878 Query 26303 AGAGGGTCGGCGACTATCA 26321 || | ||||||||||| || Sbjct 44879 AGCGTGTCGGCGACTACCA 44897 >seq116 Length=83673 Score = 163 bits (180), Expect = 5e-35 Identities = 814/1276 (64%), Gaps = 43/1276 (3%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || || || |||||||||||||| ||||| ||| ||||||||| || | || || || Sbjct 75898 GTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAG-CTGGCGTGCTTCAGG 75956 Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 || || ||||| || || | | ||||| |||| ||||| |||||||| |||| | Sbjct 75957 GGATTCAAAAGGCATGCGGAG-AGCAAGGAAAG-CGTCAGCCAGGCCCTGTACACCGACA 76014 Query 221534 CCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593 || ||||| | ||| | | ||||| | ||||| | || || || || || Sbjct 76015 CCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACA 76074 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||| ||||| || | |||| || ||| ||||| | Sbjct 76075 TCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTT----- 76129 Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713 | || | |||| || || || | ||||| || | ||||| | Sbjct 76130 -TAAAGTCATACTCACCCTTGTTGTAG------TCCACGAAGGAAGGAAGGGCTAGAGAT 76182 Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 || ||||| ||||| || ||||| || | |||| || ||||| || || ||| Sbjct 76183 GCTAGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGG 76242 Query 221774 TTGCTGCACTTG--ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCC 221830 || | ||| ||||| || || | || ||||| |||||| ||| ||| | || Sbjct 76243 TTC--GAACTGCGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTG-CAGTGGTCT 76299 Query 221831 TTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGT 221890 |||||||||||||| || ||||||||| ||||||| ||||||| | ||| ||| Sbjct 76300 TTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGT 76359 Query 221891 TCTCTGGCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATAGAG 221949 | ||||| || | || ||| || |||||| ||| || ||| ||| || Sbjct 76360 T-TCTGGGCCTTGACAACCATGCGACCGCGACCCTC---CTTCTCGTACTTTTCATACAG 76415 Query 221950 CATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAG 222009 ||||||| ||| || || || ||| ||| || || ||| ||||| || Sbjct 76416 AGCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCACATGAG 76475 Query 222010 ACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTG 222069 | |||||| || || | | || | || |||||| | ||| ||||||||| ||| Sbjct 76476 AGTCCAGTCCTCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAA 76535 Query 222070 AAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTC 222129 || || || | | || || ||| |||| ||| || | | || | ||||| Sbjct 76536 GAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTC 76595 Query 222130 AAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCC 222189 || | ||||| ||||| ||||| ||||| | ||| | || || ||||||||||| || Sbjct 76596 GAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCC 76655 Query 222190 ACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGT 222248 |||||| | || ||| | | | |||||| | || || | || || | |||| Sbjct 76656 ACCCTGGT-CAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGT 76714 Query 222249 TGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACA 222308 | || |||||| ||||| |||||| | || ||| | | ||| || ||| Sbjct 76715 TCGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCAC---GAATAC-GGTGAACA 76770 Query 222309 T----GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATG 222364 | ||||||||||| || || || |||||||| || ||||||| || || Sbjct 76771 TTGAGACCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAA 76830 Query 222365 ATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTG 222424 |||||||| || ||| ||||| | || | || ||||| || |||| ||||| | | Sbjct 76831 ATGCCCTCGATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGG 76890 Query 222425 GTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGA 222484 | | || ||| ||||| ||||| || ||||| || ||| | |||||||| || Sbjct 76891 GGAGTACCGGCATTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTAGACATAAGG 76950 Query 222485 TCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATG 222544 | ||| || || | || | ||| ||||| || ||| || || | ||| Sbjct 76951 TTGTAGGTTTCAAGCACACGATCGACTTTGTCACCCCAAATACCCACAGCAACACGCATT 77010 Query 222545 TACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGATTTTT 222602 ||||| |||||| | ||| ||| || | || | ||| |||||||| | Sbjct 77011 ATCATGTGCTGGGGACGCTCAACAATCTTACCATCAAGTT--TGAGTAGGTACGAACGCT 77068 Query 222603 CCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGT 222662 | || ||||| || |||||||| | | || ||||| | | ||| || | ||| | || Sbjct 77069 CGAGCGTCTTAAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTACACAATGGCAGAGT 77128 Query 222663 CCAGCTCCGACTTGTG 222678 ||||||| |||||| Sbjct 77129 CCAGCTCATCCTTGTG 77144 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | || || | | |||||| | ||| || ||| | || Sbjct 75606 GTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAGGG 75665 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 ||||| || ||| ||||||||||| ||||| | ||||||||| || ||||||||||| || Sbjct 75666 TTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAAC 75725 Query 221236 CAGCAGACTGTTGCG 221250 || ||| ||||| Sbjct 75726 TAGAAGAGAATTGCG 75740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928833421651200