Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq88 123 3e-23
>seq88
Length=95151
Score = 123 bits (136), Expect = 3e-23
Identities = 327/496 (66%), Gaps = 5/496 (1%)
Strand=Plus/Minus
Query 138169 TGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATAC 138228
|||||||||| |||| |||||||| || ||||| || ||||| ||||| ||||| |
Sbjct 54219 TGAGATGTTTCTTGACACAGATAGGACCGACACCAGGGCCACCACCGCCATGAGGAATGC 54160
Query 138229 AGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTA 138288
||||||||||||| | || | || || ||||| || ||| |||| || | |
Sbjct 54159 AGAATGTCTTATGCAGGTTCAAGTGGCACACATCAGCGCCAATCTCACCAGGAGAGGTAA 54100
Query 138289 GACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAA 138348
|||| | ||| ||||| | || || || || | || ||||| ||||| | |||| |
Sbjct 54099 GACCAATCTGGGCATTCATGTTGGCGCCGTCCATGTACACCTGGCCACCGTAAGCATGCA 54040
Query 138349 CGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAA 138408
| | | ||| || || || || | |||||| | |||| ||| || || || |
Sbjct 54039 CAAGATCACAGGCCTTTCGGACGTCAGGTTCAAAGATACCAAAAGTACTAGGGTAAGTGA 53980
Query 138409 TCATAATACATGAGAGTTCAAATGTATTCATGATTGC-TTTCTTCTCTAGATCTTTGATG 138467
|||| || || |||||| | || | | |||| || ||| ||||| |||
Sbjct 53979 TCATGATGCAGCCAAGTTCATCAGCATGC-TTTTTGCACTTGGCCTCCAGATCAGCGATA 53921
Query 138468 TCTATGTTGCCATCA---TCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACT 138524
|| | ||| ||| | ||||||||||| | ||||| ||| ||||||||| |
Sbjct 53920 TCCAAGTTTCCAGTAGTGGTATCACACTTGATAGGAACAACACGCATACCTGCCATGGCA 53861
Query 138525 GCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCA 138584
|| ||||| || |||||||| || || | || |||| ||| | || | ||| |
Sbjct 53860 GCCGAGGCAGGGTTGGTTCCATGGGCAGAGACAGGAATCAAACAGATATCACGTTTCTTG 53801
Query 138585 TCTCCTGATCCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGAT 138644
|||| | | | |||||| ||||| || || || ||| |||| || || |
Sbjct 53800 CCTCCATTTTCCTCATGATAGCGGTGGATAGCACGAAGACCAGCAAACTCTCCTTGGGCA 53741
Query 138645 CCTGCGTTAGGTTGTA 138660
|| | |||||| ||||
Sbjct 53740 CCAGAGTTAGGCTGTA 53725
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578991307269600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |