Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq116 145 9e-30 seq105 105 8e-18 seq415 84.2 3e-11 >seq116 Length=83673 Score = 145 bits (160), Expect = 9e-30 Identities = 1036/1647 (63%), Gaps = 47/1647 (3%) Strand=Plus/Minus Query 75305 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGT 75364 |||| ||||||| |||| || ||||| ||||| ||||| || | ||| |||| Sbjct 76931 TTCACTCACGCATCACCTACGCTCTTTAATGCCGGTACTCCCCAGGCTCAGTTGTCTTCA 76872 Query 75365 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 75424 || ||||| ||| || ||||| ||| ||| | || || || | || || | | Sbjct 76871 TGTTTCCTAGTCGACATGAAGGATGACAGCATCGAGGGCATTTACGATACCCTCAAGACT 76812 Query 75425 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCC 75484 ||||| || || ||| |||||| ||||| || | | | || | | | ||| Sbjct 76811 TGTGCCATGATTTCCAAGATGGCTGGTGGTATCGGTCTCAATGTTCACCGTATTCGTGCC 76752 Query 75485 AATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 75544 | | ||| ||| || || || ||| || | || || |||| ||||| || Sbjct 76751 ACTGGCTCTTACATTGCTGGCACTAACGGTACTTCGAACGGCATCGTTCCCATGCTACGT 76692 Query 75545 GTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAG------GGGTCC 75598 || || ||| ||| || || ||||| | || ||| | |||| || || Sbjct 76691 GTTTTCAACAACACCGCCCGTTATGTTGACCA---GGGTGGAAACAAGCGACCTGGAGCC 76635 Query 75599 ATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTC 75658 | || | || | || ||||||||||| ||| || | |||||||| || ||||| Sbjct 76634 TTTGCCATTTATCTCGAGCCATGGCATGCTGATGTCTTCGAGTTCCTCGACTTACGCAAG 76575 Query 75659 AACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGA 75717 ||||| || | ||||| | || ||| | | || || || | |||||||||| || Sbjct 76574 AACCACGGAAAGGAAGAAG-TCCGTGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGA 76516 Query 75718 CCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGG 75776 | | ||||||||||| |||||| || || | ||| |||| | || || | || | Sbjct 76515 CTTGTTCATGAAGCGTGTTGAGAAGAATGAGGACTGGACTCTCATGTGCCCCAATGAATG 76456 Query 75777 CACCAGGTCTCTCCGAC-GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAA 75835 | || | | | | || || ||| || |||||||| || || || |||||| || Sbjct 76455 CCCCGGCT-TGGCGGATTGCTATGGC-GAAGAGTTTGAGGCTCTGTATGAAAAGTACGAG 76398 Query 75836 GAGGAGGGTAGAG--CCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTC 75892 |||||||| | | | ||| ||| | || | | || | ||| | || ||||| Sbjct 76397 AAGGAGGGTCGCGGTCGCATGGT--TGT-CAAGGCCCAGAAACTGTGGTATGCCATTCTG 76341 Query 75893 AAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAG 75952 | | ||||| |||||||| | || | |||||| ||||| || || ||| ||| Sbjct 76340 GAGGCTCAGACTGAGACTGGCAACCCTTTTATGCTCTACAAAGACCACTGCAACCGCAAG 76281 Query 75953 AGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAG 76012 || || || || ||| | || || || || || || || ||||| || ||| | ||| Sbjct 76280 AGCAATCAGAAAAATCTAGGTACCATTCGCAGTTCGAACCTGTGCACTGAGATTATCGAG 76221 Query 76013 TACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTAT 76072 ||| | |||||| ||||| ||||| | ||||| | |||||||| | Sbjct 76220 TACTGTGCCCCTGATGAGGTCGCTGTGTGCAACCTAGCATCTCTAGCCCTTCCTTCCTTC 76161 Query 76073 GTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTT 76132 || | | | | | | ||| | | |||| || || ||| |||| | ||||| Sbjct 76160 GTGGACTACAACAAGGGTGAGTATGACTTTAAAAAGCTACACGAAGTCACCCAAGTTGTT 76101 Query 76133 ACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAG 76192 || |||||||| |||| || ||| || || || || || | || Sbjct 76100 GTTCGCAACCTAAACCGCATCATCGATGTGAATCACTACCCTGTCCAGGAAGCTCACAAC 76041 Query 76193 TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT 76252 || ||||| ||| | || |||||| | ||||| || || || || || | || || Sbjct 76040 AGCAACATGCGCCACCGTCCCATTGGTGTCGGTGTACAGGGCCTGGCTGACGCTTTCCTT 75981 Query 76253 TTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAA 76312 |||| | ||||| || |||||| || | || | || |||||| Sbjct 75980 GCTCTCCGCATGCCTTTTGAATCCCCTGAAGCACGCCAGCTCAACAAGCAGATTTTTGAA 75921 Query 76313 ACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTAT 76372 ||||| || ||||| | || || ||| | || | | | ||| | || Sbjct 75920 ACCATCTACCACGCCGCACTAACTGCTTCAATGGAAATCGCCCAGACGGAGGGTACTTAC 75861 Query 76373 GAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGT 76432 || | |||||||||||| | |||||||| | | |||||||||||||||| | || Sbjct 75860 TCAACTTATGAGGGTTCTCCTGTCTCCCAAGGCATCTTGCAGTTTGATATGTGGG-ATGT 75802 Query 76433 GAAACCAAGCTCAAC--TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTC 76490 || || || | | | | |||||| | ||| ||||| || ||| || | ||| Sbjct 75801 GACTCCTAG-TGATCTGTGGGACTGGACTTCTCTAAAGGAGAAGATTAAGCAGCATGGTG 75743 Query 76491 TTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 76550 | || || |||| | | ||||| ||||| |||||| ||| | || || |||| | Sbjct 75742 TACGCAATTCTCTTCTAGTTGCACCCATGCCTACAGCCAGCACGTCGCAGATTCTGGGCA 75683 Query 76551 ATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTG 76610 | ||||| ||||| ||||| |||||| | ||||| |||| | | | || || || | Sbjct 75682 ACAATGAGTGCTTCGAACCCTACACATCCAACATTTACCAGCGCCGCGTTCTTGCTGGCG 75623 Query 76611 AGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGA--TTGGTCTCTGGTC 76668 |||| | |||||| ||| | |||||| || || ||||| | ||||| Sbjct 75622 AGTTCCAGGTCGTCAACCCCTGGCTCCTACGTGACCT--AGTCGATCTTGGTTTATGGTC 75565 Query 76669 CAAGGATATGAAGGATCTCATGGTGAAAGCGG---GTGGTTCCATTCAAAATATCTCAGA 76725 | |||||||| ||| || | | |||| ||| |||||||| || ||||| Sbjct 75564 TGACAATATGAAGAATCGCA---TTATTGCGGACAATGGCTCCATTCAGAACATCTCTAG 75508 Query 76726 TATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAAT---CAAGATGAAAGA 76782 || || | |||||| || ||| ||| || || ||||| || | || | || Sbjct 75507 CATTCCTGCTGATATTAAAGCTCTGTACAAGACCGTTTGGGAGATTTCCCAGCGTACAGT 75448 Query 76783 TGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCT 76842 || | | ||||| || ||||||||| |||||||| ||| || ||| | | Sbjct 75447 TG---TGCAAATGGCTGCTGATCGTGGTGCTTTCATTGACCAA--TCGCAGTCTCTAAAC 75393 Query 76843 ATT--CATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAA 76899 ||| |||| || ||| || ||| |||| || | ||||| | || || ||||| Sbjct 75392 ATTCACATGAAAGATCCTACCATGGGCAAGATCACCAGCATGCACTTTGCTGGC-TGGAA 75334 Query 76900 ACAGGGGCTCAAAACCGGAATGTACTA 76926 || || ||||| || || |||||||| Sbjct 75333 ACTAGGTCTCAAGACGGGCATGTACTA 75307 >seq105 Length=86313 Score = 105 bits (116), Expect = 8e-18 Identities = 339/520 (65%), Gaps = 7/520 (1%) Strand=Plus/Plus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770 |||||||| || || ||||| |||| || ||||| |||||||||| | || |||| Sbjct 44089 TGGACTGCTGAGGAGATTGATCTGTCTAAGGATCTCCACGACTGGAACAACCGTCTGAAC 44148 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || | || || | ||||| |||| || || |||||||||| || ||||| || Sbjct 44149 AAAGACGAGCAGTACTTCATCTCCCACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATC 44208 Query 64831 GTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTCA 64890 || || ||| || | | || | | || |||||||| ||| || |||| Sbjct 44209 GTCAACGAAAATCTCGTTGAGCGCTTCTCAGGCGAGGTGCAGATCCCCGAGGCCCGCTGC 44268 Query 64891 TTCTACGCATATCAATGCCATAATG-AAATGGTTCATGGCGAAACATATTCAAAATTGAT 64949 ||||||| | || | ||| ||| ||| | || ||||| || || |||| Sbjct 44269 TTCTACGGTT-TCCAGATCATGATGGAAAACATCCACTCTGAAACCTACTCGCTGCTGAT 44327 Query 64950 TGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAACTGT 65009 ||||| ||||| ||||| || | | | | || | ||||| | ||| | Sbjct 44328 TGACACCTACATCAAGGAGCCCTCGCAGCGCACATACCTGTTCAATGCCATTGACACTAT 44387 Query 65010 ACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCT 65068 || || || ||||| | ||||| |||| ||| | | |||| | ||| Sbjct 44388 TCCCTGCATCCGCCGCAAGGCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTCGA- 44446 Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 | || ||| ||||||| |||| ||||| ||| ||||| ||||| ||||| || | | Sbjct 44447 CGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGGCGCCT 44506 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || | | || | ||| | ||||| ||||||||||| || || ||||||||| | Sbjct 44507 TCGCCTCCATCTTCTGGCTCCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAACG 44566 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 | |||||||| || |||||||| || ||| || ||||| Sbjct 44567 AGCTTATTTCTCGTGATGAGGGCCTGCACACCGACTTTGC 44606 >seq415 Length=20797 Score = 84.2 bits (92), Expect = 3e-11 Identities = 186/274 (68%), Gaps = 10/274 (4%) Strand=Plus/Minus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGT---GGTGCCAAGATC 175287 ||| ||||| | || |||||| | ||||| | | |||| || |||||||||||| Sbjct 13912 GAGTTTGTGCAATTCCTCAAGAAGCCCGAAA---AGTTTGTGCGTCTGGGTGCCAAGATC 13856 Query 175288 CCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCC 175347 || || ||||| | || |||| || || ||||| ||||| || || ||| ||| Sbjct 13855 CCGCGCGGCGCTATCCTATCGGGCCCTCCGGGAACGGGCAAGACGCTGCTAGCCAAGGCC 13796 Query 175348 ATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAA--ACTTTGTGGAGA 175405 | || || || ||| || || ||| || || | || || || | ||||| |||| Sbjct 13795 ACGGCTGGCGAGTCAGGCGTTCCGTTCTTC-AGCG-TCAGCGGCTCCGAGTTTGTCGAGA 13738 Query 175406 TGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATC 175465 ||||||| || |||||| | | || || ||||| |||| | || ||| | || Sbjct 13737 TGTTTGTCGGCGTGGGTCCGTCGCGTGTGCGTGATCTTTTTGCTACGGCGCGCAAGAACG 13678 Query 175466 AACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 ||||| || | || ||||| ||||||||||| Sbjct 13677 CGCCATGCATCATTTTTATTGACGAGATTGATGC 13644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562292022400