Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq116 134 1e-26
seq100 93.3 4e-14
seq61 86.0 6e-12
>seq116
Length=83673
Score = 134 bits (148), Expect = 1e-26
Identities = 568/890 (64%), Gaps = 39/890 (4%)
Strand=Plus/Plus
Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATTGTTGCAATATTTTGA 138417
|||||||| ||||||||||| ||| | ||||| || || | | || || |||
Sbjct 75463 ATCTCCCAAACGGTCTTGTACAGAGCTTTAATATCAGCAGGAATGCTAGAGATGTTCTGA 75522
Query 138418 ATGCTCCCGTTGGCCGCAATGATGCGATTTCTCAT---GTCAT-CGTTGTAC--AGATTC 138471
||| || ||| ||||||| |||||||| |||| |||| | | || |||| |
Sbjct 75523 ATGGAGCCATTGTCCGCAATAATGCGATTCTTCATATTGTCAGACCATAAACCAAGAT-C 75581
Query 138472 AACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACT 138531
||| | ||| || | || | ||| | |||||| || || || || | ||
Sbjct 75582 GACTAGGTCACGTAGG-----AGCCAGGGGTTGACGACCTGGAACTCGCCAGCAAGAACG 75636
Query 138532 CGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGA 138591
|| || |||||||||| ||| | || || || | || ||||| |||||||||||
Sbjct 75637 CGGCGCTGGTAAATGTTGGATGTGTAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGC 75696
Query 138592 GCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTG 138651
| |||| | || || |||||| || || | ||||||||| |||| ||| || ||||
Sbjct 75697 GACGTGCTGGCTGTAGGCATGGGTGCAACTAGAAGAGAATTGCGTACACCATGCTGCTTA 75756
Query 138652 ATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCG 138711
|| ||||| || || | ||||||||||| ||| ||||| | | |||||||||
Sbjct 75757 ATCTTCTCCTTTAGAGAAGTCCAGTCCCACAGATCACTAGGAGTCACATCCCACATATCA 75816
Query 138712 TACTGTAACATTCCCAAACTTGCGGGACTG-----CCTTCGTACGAATCGTATACACCAA 138766
|||| || || | |||| | ||| | || || || | ||| |||
Sbjct 75817 AACTGCAAGATGC-----CTTGGGAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCT 75871
Query 138767 ACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCT 138826
| || || | || | || || || | | ||| || ||||| |||||
Sbjct 75872 CCGTCTGGGCGATTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCT 75931
Query 138827 GCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGT 138886
||| |||||| || || || | | || | ||||||||||| ||| ||||
Sbjct 75932 GCTTGTTGAGCTGGCGTGCTTCAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGT 75991
Query 138887 CGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG- 138945
| ||||| || || || || || || | || || ||||||| || ||| ||| |
Sbjct 75992 CAGCCAGGCCCTGTACACCGACACCAATGGGACGGTGGCGCA----TGTTGCTGTTGTGA 76047
Query 138946 GCTTC---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACC 139002
||||| || ||| || | || ||||||||||| ||||| || || || || ||
Sbjct 76048 GCTTCCTGGACAGGGTAGTGATTCACATCGATGATGCGGTTTAGGTTGCGAACAACAACT 76107
Query 139003 TTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCG 139062
| || | | || || ||| || || ||| ||||| ||| |||| | |
Sbjct 76108 TGGGTGACTTCGTGTAGCTTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAG--G 76165
Query 139063 ACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTG 139122
| | | | | || |||| ||||||||| || || || || ||| | | |
Sbjct 76166 AAGGAAGGGCT-------AGAGATGCTAGGTTGCACACAGCGACCTCATCAGGGGCACAG 76218
Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182
|| |||| ||| || | |||| || || || ||||||| ||||| ||||||
Sbjct 76219 TACTCGATAATCTCAGTGCACAGGTTCGAACTGCGAATGGTACCTAGATTTTTCTGATTG 76278
Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTC 139232
|| || ||||| || |||||||| |||||| | || ||||||| ||
Sbjct 76279 CTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTCTC 76328
>seq100
Length=89839
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | || || || || ||||| || ||||| ||||| || || || |
Sbjct 17021 GATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTC 17080
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || ||||| || ||||| || || || || || || ||
Sbjct 17081 GGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCA 17140
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || ||||||| || || || |||||||||||| | | | |||| || || ||
Sbjct 17141 GCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAA 17200
Query 24883 CATTCAAAAGG 24893
|||||| ||||
Sbjct 17201 CATTCAGAAGG 17211
>seq61
Length=115161
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || || ||||| || ||||| || || || || | | ||||| | || |
Sbjct 22474 AAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCTTCGGACACGATCGACAAC 22415
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || |||||||| ||||| || || || || || || || || || |||||||||
Sbjct 22414 GTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCTTGATCTTT 22355
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
|| || || ||||| |||||| | | |||| || || ||||| || ||||| ||
Sbjct 22354 GCTGGTAAGCAGCTTGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAGGAGTCC 22295
Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||| | || |||| |||| || ||
Sbjct 22294 ACCCTCCACCTTGTCCTGCGCCTGCGTGGTGG 22263
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449892088754400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |