Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq105 159 5e-33
seq124 123 4e-22
seq116 96.9 5e-14
>seq105
Length=86313
Score = 159 bits (176), Expect = 5e-33
Identities = 215/295 (73%), Gaps = 11/295 (4%)
Strand=Plus/Minus
Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436
|| || |||||||| || ||||| |||||| ||||||| ||| ||| ||||||
Sbjct 44552 AGACCAGGCATGAGACCACGCTTGCGGAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAA 44493
Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496
|||||||||||||| || |||||| | || || |||| |||||| || | | |||
Sbjct 44492 AAGATGCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGT--CGA----CTCC 44439
Query 794497 TTGT---TGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCG 794553
|||| |||||||||||| ||||| || ||||| | | |||| | |||||
Sbjct 44438 TTGTCGGTGATCCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCA 44379
Query 794554 ATGGCGCGAAAGAGGTG-GTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAG 794612
||||| || |||| || | ||| || ||||||| ||||||||| || || ||
Sbjct 44378 ATGGCATTGAACAGGTATGTGCGCTGCGAG-GGCTCCTTGATGTAGGTGTCAATCAGCAG 44320
Query 794613 CGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667
||||||||| || |||||||||||||| || ||||||||| || || ||||||
Sbjct 44319 CGAGTAGGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCAG 44265
Score = 122 bits (134), Expect = 1e-21
Identities = 168/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| ||||| || ||| ||| || ||||| |||||||| |||||||||| ||||||
Sbjct 44894 TAGTCGCCGACACGCTTCTCAAAGAAGTTAGTCTTGCCGCCGAGCGAGATGTTCTCCATG 44835
Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027
| ||| ||||| | | |||| ||||||| || || | |||||||||||
Sbjct 44834 AAGTCGAAGGGGTTTGTGGCACGGTACACCTTCTCGTTGCCTAGAGCAACAAGCAGGCGG 44775
Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087
|| || || || ||||||||||| ||| || | |||||||| || | || | |
Sbjct 44774 TCAGCAACAAACTCAATGTACTGCTTCATCAGATCAGCGTTCATTCCTAGCAGACCGCAG 44715
Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCT 794142
||||| | |||| | | ||||| ||||||||| ||||||| || |||||||||
Sbjct 44714 GGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCAGTGATGATCT 44660
>seq124
Length=77309
Score = 123 bits (136), Expect = 4e-22
Identities = 92/108 (85%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| ||||||| || || ||||||||||| |||||| | || |||||||| || ||||||
Sbjct 49781 GCCTCCAACTATCTTGATATCAAGCCCCTGCTCGATGTTGGCTGCAAGACTGTCGCCAAC 49722
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATC 2035754
| |||||||||||||| ||||| || |||||||||||||| ||||||
Sbjct 49721 ATGATCAAGGGCAAGTCTCCCGAAGAAATCCGCAAGACCTTCAACATC 49674
>seq116
Length=83673
Score = 96.9 bits (106), Expect = 5e-14
Identities = 176/258 (68%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| ||||| || || |||| ||| || || || |||||||| || | |||||| ||
Sbjct 76659 CTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCGA 76718
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||||| ||||| || | ||| | ||| | ||| || | ||| | | ||
Sbjct 76719 AGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGACC 76778
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || || ||| |||||| || | || || | || || || ||||| ||||||||
Sbjct 76779 GATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCCCTC 76838
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| ||| |||||||||| | || || || || || || | | | || ||
Sbjct 76839 GATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGTACC 76898
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
|||||| |||||||| ||
Sbjct 76899 GGCATTAAAGAGCGTAGG 76916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916142152930220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |