Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq317 89.7 2e-12 >seq317 Length=32422 Score = 89.7 bits (98), Expect = 2e-12 Identities = 119/162 (73%), Gaps = 5/162 (3%) Strand=Plus/Plus Query 309685 TCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCA 309744 || ||||| | ||| || |||||||| ||||| ||||| | ||||| |||| || ||| Sbjct 11962 TCAATCAAATGGGCAATGGTCATACGCGAAGGGATGGCGTGGGGGTTAATGATGATATCA 12021 Query 309745 GGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAAT 309803 || | || || | || | || ||||||||||||| |||| ||| |||||| Sbjct 12022 GGCGTGATGCCCTCGC---GGGTAAATGGCATATCTTCTTGGCGGTA-TGTCACACCAAT 12077 Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 || ||||||||| |||| | || ||||||||||| ||||| Sbjct 12078 TGTACCCTTTTGACCGTGACGAGACGCAAACTTGTCGCCAAT 12119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951949890521440