Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq116 178 1e-39 seq105 167 2e-36 seq28 116 4e-21 seq100 100 3e-16 seq61 98.7 1e-15 >seq116 Length=83673 Score = 178 bits (196), Expect = 1e-39 Identities = 1096/1740 (63%), Gaps = 47/1740 (3%) Strand=Plus/Plus Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGT---CGCTTTATCTTCATC 148118 ||||||||||| || ||||| ||||| ||||||| | | | |||| ||| Sbjct 75409 TGGTCAATGAAAGCACCACGATCAGCAGCCATTTGCACAACTGTACGCTGGGAA---ATC 75465 Query 148119 TCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACC 148178 ||||| | ||||||||||| || |||| | | ||||||| |||| ||| | Sbjct 75466 TCCCAAACGGTCTTGTACAGAGCTTTAATATCAGCAGGAATGCTAGAGATGTTCTGAATG 75525 Query 148179 GAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATC 148238 ||||| || ||||| ||| |||| ||| | ||| | ||| || |||| Sbjct 75526 GAGCCATTGTCCGCAATAATGCGATTCTTCATATTGTCAGACCATAAACCAAGATCGACT 75585 Query 148239 AGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA 148298 |||||| | || | | || || ||||| |||||||| || || ||||| ||| | Sbjct 75586 AGGTCACGTAGGAGCCAGGGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGG 75645 Query 148299 TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTT 148358 || | |||| || | ||||| || |||| |||||||||| |||||||| || | Sbjct 75646 TAAATGTTGGATGTGTAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTG 75705 Query 148359 GCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGC 148418 || || |||||| || || || || || ||||| | ||| | | || || || | Sbjct 75706 GCTGTAGGCATGGGTGCAACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCC 75765 Query 148419 TTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGA 148478 || |||| | ||||||||| || || ||||| | |||||| || |||||| Sbjct 75766 TTTAGAGAAGTCCAGTCCCACAGATCACTAGGAGTCACATCCCACATATCAAACTGCAAG 75825 Query 148479 ATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGT 148538 ||||| || | || ||||| || | ||| | || | || | || | | Sbjct 75826 ATGCCTTGGGAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATT 75885 Query 148539 TCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGC 148598 || || || ||| ||| ||| || || || ||| ||| |||||||| | Sbjct 75886 TCCATTGAAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGG 75945 Query 148599 GCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGT 148658 || | ||| | ||||| || || | || ||||| || ||||||||| Sbjct 75946 CGTGCTTCAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGT 76005 Query 148659 ACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGATAG 148718 || || || |||||||| ||||| |||||| | | | || || || || ||| Sbjct 76006 ACACCGACACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAG 76065 Query 148719 TGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGC 148778 || || |||||||| || || ||||| || || || | || | | | | ||| Sbjct 76066 TGATTCACATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGC 76125 Query 148779 AATTCAAAATCGTAC---------TTGTCATCTACGATGCATCGGTTCACGGCGATAGAG 148829 || ||| || ||| |||| || |||| | | | | ||| | ||| Sbjct 76126 TTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGG---AAGGGCTAGAGAT 76182 Query 148830 GCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGA 148889 ||||| |||||||| || |||||| ||||| | |||||| | ||||| | |||||| Sbjct 76183 GCTAGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGG 76242 Query 148890 TT---GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCC 148946 || |||| || | || | || || ||||||||||||| |||||| ||| Sbjct 76243 TTCGAACTGCGAATGGT---ACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCT 76299 Query 148947 TTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGCA 149004 ||||| ||||| | || |||||| || ||| | |||| ||| | | | || Sbjct 76300 TTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCA--CA 76357 Query 149005 GGTCCTGCGCGCGCACTTGC-TGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGC 149063 | | ||| || || | ||| ||||||||||| |||||| |||||| Sbjct 76358 GTTTCTGGGCCTTGACAACCATGC-GACCGCGACCCTCCTTCTCGTACTTTTCATACAGA 76416 Query 149064 CGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGC 149123 ||| ||| | ||||| |||||||| | | |||||||| | | ||||||||||| Sbjct 76417 GCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCACATGAGA 76476 Query 149124 GACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTAC 149183 | ||| | | | | | || |||||||| |||| ||| | ||| || || | Sbjct 76477 GTCCAGTCCTCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAG 76536 Query 149184 ATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTG 149243 | ||||| || || | ||||| || ||| ||| | || ||| | | Sbjct 76537 AATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCG 76596 Query 149244 AATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCG 149300 || | || || ||||| ||||| | || | || | || || |||||| || Sbjct 76597 AAGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCA 76656 Query 149301 CCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTG 149360 |||||||| || | || | ||||||| || || || | ||| || | ||||| | Sbjct 76657 CCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTC 76716 Query 149361 GCAGTGCCGTTAGT-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGAC 149419 | ||| |||||||| ||| |||| | ||| || || | ||| || |||| Sbjct 76717 GAAGTACCGTTAGTGCCAGC-AATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAG 76775 Query 149420 GCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAGTAGATG 149477 ||||| || || ||| | ||| || || || | |||| ||| || ||| ||| Sbjct 76776 ACCGATACCACCAGCCAT-CTTGGAAATCATGGCACAAGTC-TTGAGGGTATCGTAAATG 76833 Query 149478 CCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGC 149537 |||||||||||||| ||||||| | || || || || ||| || | | Sbjct 76834 CCCTCGATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGA 76893 Query 149538 GTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTCATCATCTC 149596 || ||||| || | || || ||||| || || | || || | ||| | | Sbjct 76894 GTACCGGCATTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTAG-ACATAAGGTT 76952 Query 149597 GTACGACTCGAGCACGCGGTCCA---TGTCATCGCCATGGATGCCTATGGCGACGCGCAT 149653 ||| | || ||||| || || | ||||| | ||| || || | || || ||||| Sbjct 76953 GTAGGTTTCAAGCACACGATCGACTTTGTCA-CCCCA--AATACCCACAGCAACACGCAT 77009 Query 149654 CAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTC 149713 | ||| ||||| || ||||| | | || ||| |||||| | ||| || Sbjct 77010 TATCATGTGCTGGGGACGCTCAACAATCTTACCATCAAGTTTGAGTAGGTACGAACGCTC 77069 Query 149714 TAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTC 149773 || ||||| |||||||||||| ||||| ||||| ||| ||| ||||||| | ||| Sbjct 77070 GAGCGTCTTAAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTACACAATGGCAGAGTC 77129 >seq105 Length=86313 Score = 167 bits (184), Expect = 2e-36 Identities = 354/522 (68%), Gaps = 15/522 (3%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| |||||||| || |||||||| ||||| || ||||| | | ||| ||||| | Sbjct 44898 CTGGTAGTCGCCGACACGCTTCTCAAAGAAGTTAGTCTTGCCGCCGAGCGAGATGTTCTC 44839 Query 120411 CATAAACTCGAACGGGTTGCTCGC--GTTAAAGTATTTCGGCTGGCCCAACTGTACGAGC 120468 ||| || ||||| ||||| | || | || | | ||| | ||| | || ||| Sbjct 44838 CATGAAGTCGAAGGGGTTTGTGGCACGGTACACCTTCTCG--TTGCCTAGAGCAACAAGC 44781 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCA-A 120527 || ||||| || |||||||||||||||| ||| | |||||||| || |||| | Sbjct 44780 AGGCGGTCAGCAACAAACTCAATGTACTGCTTCATCAGATCAGCGTTCATTCCTAGCAGA 44721 Query 120528 CGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACAT 120587 | || |||| ||| || | ||||||||||| || | || || || ||| || Sbjct 44720 CCGCAG-GGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCAGTGATGAT 44662 Query 120588 GGCGAGCATAGTGTG---GCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCA 120644 ||| | || || ||| |||| | |||||| | | | |||||| Sbjct 44661 CTTTTGCACAAGGTCCTTGCTGGGGCGGTTGT-TCAGATGCGAGAACAG-----CAGGCA 44608 Query 120645 CGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCC 120704 |||||||| |||||||||||||| || || || || |||||||| || ||||| || Sbjct 44607 AGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACC 44548 Query 120705 GGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACAC 120764 ||||||| || | | || |||| |||| ||| ||| ||| || || || | Sbjct 44547 AGGCATGAGACCACGCTTGCGGAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGAT 44488 Query 120765 GCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGAT 120824 |||||| || |||||||| || | ||||| ||| ||||||| | |||| | ||| Sbjct 44487 GCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTCGACTCCTTGTCGGTGAT 44428 Query 120825 CCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866 |||||||| ||||| |||||||| ||| | ||| || || Sbjct 44427 CCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAAT 44386 >seq28 Length=151797 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | ||| | | | ||||| |||||||| || Sbjct 108974 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCCTCAAGCTGCTTTCC 108916 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| |||||||||||||||||||| || ||||| || |||||| ||| Sbjct 108915 AGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGATCTTGGACTT 108856 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| || || | || ||| || |||| ||| | ||| ||||| |||| || Sbjct 108855 GACATTGTCAATGGTATCAGAGGACTCGACTTCGAGGGTAATGGTCTTGCCCGTCAAGGT 108796 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 108795 CTTGACGAAGATTTGCAT 108778 Score = 113 bits (124), Expect = 4e-20 Identities = 132/176 (75%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || ||| | | | ||||| |||||||| || Sbjct 108234 GTAGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCAAGCTGCTTTCC 108176 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| |||||||| || |||||||| |||||| ||| Sbjct 108175 AGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTAGACTT 108116 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 | | |||| || || | || |||||| |||| ||||| ||| ||||| |||| Sbjct 108115 AACGTTGTCAATAGTATCCGAGGACTCCACCTCGAGGGTGATGGTCTTGCCAGTCA 108060 Score = 107 bits (118), Expect = 2e-18 Identities = 137/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| || ||||| ||| | || | | | ||||| |||||||| || Sbjct 108518 GTAGATTCTTTCTGAATGTTGTAGTCGGAAAGGGTACGGCCA-TCCTCAAGCTGCTTTCC 108460 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| ||||| ||||| |||||||| |||||| ||| Sbjct 108459 AGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 108400 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||||| || ||| || |||| ||| | ||| || ||||| || || Sbjct 108399 GACGTTGTCAATGGTGTCGGAGGACTCGACTTCGAGGGTAATGGTCTTTCCGGTAAGGGT 108340 Query 133643 TTTTAC 133648 || || Sbjct 108339 CTTGAC 108334 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| || ||||| || || || | | | |||||||||||||| || Sbjct 108746 GTAGATTCTTTCTGAATGTTGTAGTCCGACAGGGTACGGCCA-TCCTCGAGCTGCTTTCC 108688 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || ||||||| |||||||| || || ||||| || ||||| || |||||| ||| Sbjct 108687 AGCAAAAATGAGACGCTGCTGATCCGGGGGGATACCCTCCTTATCCTGGATCTTGGACTT 108628 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| || || | || ||| || |||| ||| | ||| ||||| |||| || Sbjct 108627 GACATTGTCAATGGTATCAGAGGACTCGACTTCGAGGGTAATGGTCTTGCCCGTCAAGGT 108568 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 108567 CTTGACGAAGATTTGCAT 108550 >seq100 Length=89839 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || ||||||||||| || || ||||| |||||| Sbjct 17176 TCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 17117 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | || | ||||| | || ||| || |||| ||| | Sbjct 17116 TCCTGAATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAATC 17057 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || || || |||||||||||||| Sbjct 17056 GTCTTACCCGTAAGGGTCTTGACGAAAATCTGCAT 17022 >seq61 Length=115161 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| || ||| | | | ||||| |||||||| | Sbjct 22292 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCA-TCCTCAAGCTGCTTAC 22350 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | ||||||||||| || || ||||| |||||||| |||||| || Sbjct 22351 CAGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACT 22410 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | |||||| | | ||| || || | ||| | ||| || || ||||| | Sbjct 22411 TGACGTTGTCGATCGTGTCCGAAGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGG 22470 Query 133642 TTTTTACGAAA 133652 | || |||||| Sbjct 22471 TCTTGACGAAA 22481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483414878095200