Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq28 86.0 6e-12
>seq28
Length=151797
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| |||| |||||| || | | || ||||| |||||||||||||| || |||
Sbjct 108771 ACGCAGACGCAGAACCAAGTGAAGAGTAGATTCTTTCTGAATGTTGTAGTCCGACAGGGT 108712
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
||| ||| |||||||| || || | | | || |||||||| ||||| || || || ||
Sbjct 108711 ACGGCCATCCTCGAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGATCCGGGGGGATACC 108652
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| ||||| || || || | | || | ||||| | | ||| |||||||
Sbjct 108651 CTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTATCAGAGGACTCGACTTCGAG 108592
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || || |||| || || | ||| || |||||
Sbjct 108591 GGTAATGGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 108550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476605361512800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |