Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq116 158 2e-33
seq105 102 1e-16
seq415 87.8 2e-12
>seq116
Length=83673
Score = 158 bits (174), Expect = 2e-33
Identities = 1032/1639 (63%), Gaps = 31/1639 (2%)
Strand=Plus/Plus
Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATA-TGCATAGAAGAGAGCTT 110427
|||||||| || |||||||| ||| ||||||| || || | ||||| | || |||
Sbjct 75307 TAGTACATGCCCGTCTTGAGACCTAGTTTCCA-GCCAGCAAAGTGCATGCTGGTGATCTT 75365
Query 110428 GGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCC 110487
| ||| || ||| || |||| | ||| | | || |||||||||||| ||
Sbjct 75366 GCCCATGGTAGGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACC 75425
Query 110488 CCGTTGTGCCGCCATATCAATGACATCCTTCATCTT---AATTTCCCAAACTGTGCGATA 110544
|| | || ||||| | | || | | || ||| |||||||| || ||
Sbjct 75426 ACGATCAGCAGCCATTTGCA---CAACTGTACGCTGGGAAATCTCCCAAACGGTCTTGTA 75482
Query 110545 GAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCAC 110604
||| || |||||| | || || ||||| ||||| ||||| || || |
Sbjct 75483 CAGAGCTTTAATATCAGCAGGAATGCTAGAGATGTTCTGAATGGAGCCATTGTCCGCAAT 75542
Query 110605 CATGAGATCCTTCATATCCTTGGACCAGAGACCAA--TCTTCTTGAGGTCATTGACGAGG 110662
||| ||| |||||||| | ||||| | ||||| || || |||||| | |||
Sbjct 75543 AATGCGATTCTTCATATTGTCAGACCATAAACCAAGATCGACT--AGGTCACGTAGGAGC 75600
Query 110663 TGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTG 110722
|||||| | ||||| || || || | | | |||| ||||| | ||||
Sbjct 75601 CAGGGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTG 75660
Query 110723 TATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGT 110782
|| ||||| ||||| ||||| || |||| || || | ||| |||||| ||||| |||
Sbjct 75661 TAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGT 75720
Query 110783 GCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAG 110842
|| | | |||| || || | ||| | || ||| || ||||| ||| | ||||
Sbjct 75721 GCAACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAG 75780
Query 110843 TCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACG 110900
|| | | | | || || |||| | ||||||| |||||||| | | ||||||||
Sbjct 75781 TCCCACAGATCA-CTAGGAGTCACAT-CCCACATATCAAACTGCAAGATGCCTTGGGAGA 75838
Query 110901 CGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCT 110960
| |||||||||||| | ||| || | ||| | | | || | ||| ||
Sbjct 75839 CAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAG 75898
Query 110961 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 111020
|| | ||||| || ||||||||||| || | || | || |||||| |
Sbjct 75899 TTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTTCAGGGG 75958
Query 111021 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 111080
| ||||| | |||| || || | || || || || || ||||| | |||||
Sbjct 75959 ATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAA 76018
Query 111081 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 111140
| || | ||| ||||| || || | || || || || || ||| || |
Sbjct 76019 TGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACATCGA 76078
Query 111141 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 111200
||| |||||||| || ||||| | |||| ||| || || |||| | | |||
Sbjct 76079 TGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCAT 76138
Query 111201 AAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAG 111260
| | | | | | || | |||||||| | ||||| | ||||| ||||
Sbjct 76139 ACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCTAGAGATGCTAGGTTGCACACAG 76198
Query 111261 CCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCG 111320
| |||||| | |||||| | ||| || || || | ||| ||||| ||| |
Sbjct 76199 CGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTGCGAATGG 76258
Query 111321 TCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCG 111380
| || | ||| || || || ||||| |||||| || ||||||||||| | ||
Sbjct 76259 TACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAGGGT 76318
Query 111381 TCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATG 111439
| || ||||| ||||| | | ||||| || | ||| | || | | || | ||||
Sbjct 76319 TGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTG-ACAACC 76377
Query 111440 GCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACC 111499
| | || |||||| |||||||||| || || || |||||||| || |||
Sbjct 76378 ATGCGACCGCGACCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTC-GCCATA 76436
Query 111500 GC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACCTTC-- 111555
|| || | | | | || || || | || || | |||| ||| | || | |||
Sbjct 76437 GCAATCCGCCA-AGCCGGGGCATTCATTGGGGCACATGAGAGTCCA--GTCCTCATTCTT 76493
Query 111556 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACC 111614
|||||| ||||||||||| | ||| |||||||||| | || || || | | |||
Sbjct 76494 CTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCACG 76553
Query 111615 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 111674
|| | ||||| | || ||||| ||||| || |||||||| | || ||| || ||||
Sbjct 76554 GA-CTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGAAGACATCAGCATGCC 76612
Query 111675 ATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGC 111731
||||||| ||||| | || | | ||| ||| ||| | || | ||||| |
Sbjct 76613 ATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCCTGGTCAACATAAC 76672
Query 111732 GCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCC 111791
| || ||| ||| || || || ||||| |||| || || | || ||| || || |
Sbjct 76673 GGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCGAAGTACCGTTAGTGC 76732
Query 111792 CCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCC 111851
| ||| ||| | |||| | | | || | | | || ||||| ||||||
Sbjct 76733 CAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGACCGATACCACCAGCCA 76792
Query 111852 ACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCT 111911
||| || || ||||| | | || || | || || || | ||| ||| ||||
Sbjct 76793 TCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCCCTCGATGCTGTCATCCT 76852
Query 111912 TGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGG 111971
| || ||| ||||| || |||| ||| | || ||||| ||||| ||||| |
Sbjct 76853 TCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGTACCGGCATTAAAGAGCG 76912
Query 111972 TTGGTGTTGCGTGAATGAA 111990
| |||| ||||||| ||||
Sbjct 76913 TAGGTGATGCGTGAGTGAA 76931
>seq105
Length=86313
Score = 102 bits (112), Expect = 1e-16
Identities = 338/520 (65%), Gaps = 7/520 (1%)
Strand=Plus/Minus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| || |||||||| || |||||||| || ||||||||| |||||
Sbjct 44606 GCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACCA 44547
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778
||||||||||| ||||| | ||| | || | | ||| | || ||||| |||||
Sbjct 44546 GGCATGAGACCACGCTTGCGGAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGATG 44487
Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAA 122837
||||| ||| ||||| |||| ||||| | ||| || | ||| | ||| | |
Sbjct 44486 CCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG-TCGACTCCTTGTCGGTGAT 44428
Query 122838 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 122897
||| |||| ||||| | ||||| || || || | ||| | ||||| | ||
Sbjct 44427 CCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAA 44368
Query 122898 TAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTC 122957
| | | | || ||||| ||||| ||||||||| || || |||||
Sbjct 44367 CAGGTATGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTTC 44308
Query 122958 GCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCT 123016
|| | ||| ||| ||| | || | ||||||| |||| || ||| ||||
Sbjct 44307 AGAGTGGATGTTTTCCATCATGATCTGGA-AACCGTAGAAGCAGCGGGCCTCGGGGATCT 44249
Query 123017 GAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 123076
| ||||| | | || | | || ||| || || || ||||| || ||||||
Sbjct 44248 GCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCAA 44189
Query 123077 AGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGT 123133
|||| || || |||| ||||| | || || | || |||| || | |||||||
Sbjct 44188 AGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAGT 44129
Query 123134 CGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173
||| ||||| || |||| ||||| || || ||||||||
Sbjct 44128 CGTGGAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCA 44089
>seq415
Length=20797
Score = 87.8 bits (96), Expect = 2e-12
Identities = 210/313 (67%), Gaps = 10/313 (3%)
Strand=Plus/Plus
Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689
||||||||||| ||||| || | || ||||| || | ||| || | |||| |||
Sbjct 13644 GCATCAATCTCGTCAATAAAAATGATGCATGGCGCGTTCTTGCGCGCCGTAGCAAAAAGA 13703
Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGT--TTGCGGCAGAGC 11747
|| || || | | |||||| || ||||||||||| ||||| | || || || |
Sbjct 13704 TCACGCACACGCGACGGACCCACGCCGACAAACATCTCGACAAACTCGGAGCCGCTGA-C 13762
Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807
|| || ||| || || ||| || || || |||| ||| || || ||||| ||||
Sbjct 13763 GCT-GAAGAACGGAACGCCTGACTCGCCAGCCGTGGCCTTGGCTAGCAGCGTCTTGCCCG 13821
Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC---ACTTCCAAAAT 11864
| || || |||| || | ||||| || |||||||||||||| || |||| |
Sbjct 13822 TTCCCGGAGGGCCCGATAGGATAGCGCCGCGCGGGATCTTGGCACCCAGACGCACAAACT 13881
Query 11865 ATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAA 11924
| ||||| | |||||| || | ||||| ||| | || | |||||| |||| |
Sbjct 13882 ---TTTCGGGCTTCTTGAGGAATTGCACAAACTCCATGATCTCGACCTTGGCCTCGTCCA 13938
Query 11925 TCCCCTCAACATC 11937
| || | |||||
Sbjct 13939 TTCCGGCCACATC 13951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628024306608000
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