Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq105 105 8e-18 >seq105 Length=86313 Score = 105 bits (116), Expect = 8e-18 Identities = 339/520 (65%), Gaps = 7/520 (1%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| || ||||| ||||| || || || || || |||||| |||||| Sbjct 44606 GCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACCA 44547 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||||||||| ||||| | |||||| || | || | ||| ||||| ||||| Sbjct 44546 GGCATGAGACCACGCTTGCGGAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGATG 44487 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAA 130194 ||||| ||| || || |||| || |||| ||||| | || | |||| | Sbjct 44486 CCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG-TCGACTCCTTGTCGGTGAT 44428 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 130254 |||||||| ||||| | ||||| ||| || || | || | || || | || Sbjct 44427 CCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAA 44368 Query 130255 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 130314 || | | | || || || |||||||| | || || || || || ||||| Sbjct 44367 CAGGTATGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTTC 44308 Query 130315 GCCATGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 130373 |||| ||| ||| || | ||| | ||||||| |||| || ||| |||| Sbjct 44307 AGAGTGGATGTTTTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCT 44249 Query 130374 GTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 130433 | ||||| ||| || | | || ||| || || || ||||| || |||||| Sbjct 44248 GCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCAA 44189 Query 130434 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 130490 | || || || || | ||||| | ||| || | | ||||| || | ||||||| Sbjct 44188 AGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAGT 44129 Query 130491 CGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||| |||||||| || ||||| | |||||| |||||||| Sbjct 44128 CGTGGAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCA 44089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618427624168800