Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq105 105 8e-18
>seq105
Length=86313
Score = 105 bits (116), Expect = 8e-18
Identities = 339/520 (65%), Gaps = 7/520 (1%)
Strand=Plus/Minus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| || ||| || ||||| ||||| || || || || || |||||| ||||||
Sbjct 44606 GCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACCA 44547
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
||||||||||| ||||| | |||||| || | || | ||| ||||| |||||
Sbjct 44546 GGCATGAGACCACGCTTGCGGAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGATG 44487
Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAA 130194
||||| ||| || || |||| || |||| ||||| | || | |||| |
Sbjct 44486 CCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG-TCGACTCCTTGTCGGTGAT 44428
Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 130254
|||||||| ||||| | ||||| ||| || || | || | || || | ||
Sbjct 44427 CCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAA 44368
Query 130255 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 130314
|| | | | || || || |||||||| | || || || || || |||||
Sbjct 44367 CAGGTATGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTTC 44308
Query 130315 GCCATGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 130373
|||| ||| ||| || | ||| | ||||||| |||| || ||| ||||
Sbjct 44307 AGAGTGGATGTTTTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCT 44249
Query 130374 GTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 130433
| ||||| ||| || | | || ||| || || || ||||| || ||||||
Sbjct 44248 GCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCAA 44189
Query 130434 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 130490
| || || || || | ||||| | ||| || | | ||||| || | |||||||
Sbjct 44188 AGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAGT 44129
Query 130491 CGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
||| |||||||| || ||||| | |||||| ||||||||
Sbjct 44128 CGTGGAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCA 44089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618427624168800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |