Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq116 194 2e-44
seq105 107 2e-18
>seq116
Length=83673
Score = 194 bits (214), Expect = 2e-44
Identities = 1104/1741 (63%), Gaps = 47/1741 (3%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACA---TTGATTCT 104278
|| ||| ||||| | ||||| || || | |||||| ||||| |||| | ||| |
Sbjct 77024 CCCCAGCACATGATAATGCGTGTTGCTGTGGGTATT--TGGGGT-GACAAAGTCGATCGT 76968
Query 104279 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 104336
|| | || || ||| || ||||| |||| | | ||| ||||||| |||| || |
Sbjct 76967 GTGCTTGAAACCTACAACCTTATGTCTAGCAAGTTCT--TCACTCACGCATCACCTACGC 76910
Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396
|||| ||||| ||||| || | || |||| || ||||| ||| || ||||
Sbjct 76909 TCTTTAATGCCGGTACTCCCCAGGCTCAGTTGTCTTCATGTTTCCTAGTCGACATGAAGG 76850
Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 104456
| ||| ||| | || || || | || || | | ||||| || || ||| ||
Sbjct 76849 ATGACAGCATCGAGGGCATTTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGG 76790
Query 104457 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGA 104516
|||| ||||| || | | | || | | | |||| | ||| ||| || |
Sbjct 76789 CTGGTGGTATCGGTCTCAATGTTCACCGTATTCGTGCCACTGGCTCTTACATTGCTGGCA 76730
Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576
| || ||| || | || || |||| ||||| || || || ||| ||| || || |
Sbjct 76729 CTAACGGTACTTCGAACGGCATCGTTCCCATGCTACGTGTTTTCAACAACACCGCCCGTT 76670
Query 104577 ATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
|||| | || | ||| ||| ||| | | || | ||||| ||||||||||
Sbjct 76669 ATGTTGACCAGGGTGGAAACAAGCGACCTGGAGCCTTTGCCATTTATCTCGAGCCATGGC 76610
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
| || ||| || | |||||||| || || || ||||| || | || || | || |
Sbjct 76609 ATGCTGATGTCTTCGAGTTCCTCGACTTACGCAAGAACCACGGAAAGGAAGAAGTCCG-T 76551
Query 104694 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
|| || || || |||| || || ||||| || | ||||||||| | |||||| ||
Sbjct 76550 GCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGACTTGTTCATGAAGCGTGTTGAGAAG 76491
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGG 104811
| || | ||| ||||| | || || | || || || | | | | ||| | ||
Sbjct 76490 AATGAGGACTGGACTCTCATGTGCCCCAATGAATGCCCCGGCT-TGGCGGATTGCTATGG 76432
Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGT 104871
|| |||||||| || || || |||||||||| | || ||||| | | | || | |
Sbjct 76431 CGAAGAGTTTGAGGCTCTGTATGAAAAGTACGAGAAGGAGGGTCGCG-GTC-GCATGGTT 76374
Query 104872 GCCAGCTGCCG--ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929
| || || | ||||| | || ||||| || |||| || |||||||| | ||
Sbjct 76373 GTCAAGGCCCAGAAACTGTGGTATGCCATTCTGGAGGCTCAGACTGAGACTGGCAACCCT 76314
Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989
| ||||| ||||||||| ||| |||| ||||| ||||| || ||| | ||| ||
Sbjct 76313 TTTATGCTCTACAAAGACCACTGCAACCGCAAGAGCAATCAGAAAAATCTAGGTACCATT 76254
Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049
||||| || || || || || || | || | | | |||||| ||||||
Sbjct 76253 CGCAGTTCGAACCTGTGCACTGAGATTATCGAGTACTGTGCCCCTGATGAGGTCGCTGTG 76194
Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--TTTG 105107
|| ||||| ||||| | || || || | ||||| | | | |||| | | ||
Sbjct 76193 TGCAACCTAGCATCTCTAGCCCTTCCTTCCTTCGTGGA-CTACA-ACAAGGGTGAGTATG 76136
Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167
| | | |||| || |||||||| || || ||| ||||||||| | | || |
Sbjct 76135 ACTTTAAAAAGCTACACGAAGTCACCCAAGTTGTTGTTCGCAACCTAAACCGCATCATCG 76076
Query 105168 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227
|| ||| ||||| || || |||| || || ||| | |||||||| ||||
Sbjct 76075 ATGTGAATCACTACCCTGTCCAGGAAGCTCACAACAGCAACATGCGCCACCGTCCCATTG 76016
Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCG 105287
|| ||||||| ||||| || || || | ||| || | ||| | ||||| |||
Sbjct 76015 GTGTCGGTGTACAGGGCCTGGCTGACGCTTTCCTTGCTCTCCGCATGCCTTTTGAATCCC 75956
Query 105288 ACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGG 105347
||||| | |||| || || ||||| ||||| || |||||||| || |
Sbjct 75955 CTGAAGCACGCCAGCTCAACAAGCAGATTTTTGAAACCATCTACCACGCCGCACTAACTG 75896
Query 105348 CGAGTTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404
| |||| || | || || || ||| | || ||| | |||||||||||| |
Sbjct 75895 C---TTCAATGGAAATCGCCCAGACGGAGGGTACTTACTCAACTTATGAGGGTTCTCCTG 75839
Query 105405 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT-TCACTACGAC 105463
|| ||||| | | || |||||||||||||| | ||| || || || | |||
Sbjct 75838 TCTCCCAAGGCATCTTGCAGTTTGATATGTGGGATG-TGACTCCTAGTGATCTGTGGGAC 75780
Query 105464 TGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523
||| |||| ||||| || ||| || | ||| | || || ||| || | ||
Sbjct 75779 TGGACTTCTCTAAAGGAGAAGATTAAGCAGCATGGTGTACGCAATTCTCTTCTAGTTGCA 75720
Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583
|| ||||| |||||| ||| | || || |||| || ||||| ||||| |||||||||
Sbjct 75719 CCCATGCCTACAGCCAGCACGTCGCAGATTCTGGGCAACAATGAGTGCTTCGAACCCTAC 75660
Query 105584 ACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT 105643
|| | ||||| || | | | | || || || ||||| | | ||||||
Sbjct 75659 ACATCCAACATTTACCAGCGCCGCGTTCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGG 75600
Query 105644 CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTG 105703
||| | |||||| || ||||| | ||||| | |||||||| ||| || |
Sbjct 75599 CTCCTACGTGACCTAGTCGATCTTGGTTTATGGTCTGACAATATGAAGAATCGCA---TT 75543
Query 105704 AAAGCGG---GTGGTTCCATTCAAAATAT-TGTGGATATTCCAAATGAAATTAAGAAGTT 105759
| |||| ||| |||||||| || || | | | ||||| ||| ||||| |
Sbjct 75542 ATTGCGGACAATGGCTCCATTCAGAACATCTCTAG-CATTCCTGCTGATATTAAAGCTCT 75484
Query 105760 GTACCGCACAGTTTGGGAAAT---CAAGATGAAGGATGTCATTGACATGGCCGCAGATCG 105816
|||| || |||||||| || | || | | || | | ||||| || |||||
Sbjct 75483 GTACAAGACCGTTTGGGAGATTTCCCAGCGTACAGTTG---TGCAAATGGCTGCTGATCG 75427
Query 105817 TGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTC 105876
|||| |||||||| ||| || | | || | |||| || ||| || |||
Sbjct 75426 TGGTGCTTTCATTGACCAATCGCAGTCTCTAAACATTCACATGAAAGATCCTACCATGGG 75367
Query 105877 CAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTA 105936
|||| || | |||||| | | ||||| |||||||| ||||| ||||| ||
Sbjct 75366 CAAGATCACCAGCATGCACTTTGCTGGCTGGAAACTAGGTCTCAAGACGGGCATGTACTA 75307
Query 105937 C 105937
|
Sbjct 75306 C 75306
>seq105
Length=86313
Score = 107 bits (118), Expect = 2e-18
Identities = 343/523 (66%), Gaps = 13/523 (2%)
Strand=Plus/Plus
Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 94497
||||||||||| ||| | ||||| || |||||| | |||| ||||| | ||| ||
Sbjct 44089 TGGACTGCTGAGGAGATTGATCTGTCTAAGGATCTCCACGACTGGAACAACCGTCTGAAC 44148
Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557
|| | || || | ||||| |||| || || |||||||||| || ||||| ||
Sbjct 44149 AAAGACGAGCAGTACTTCATCTCCCACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATC 44208
Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616
|| || ||| || | | ||| | | |||||||| |||| | || || | |
Sbjct 44209 GTCAACGAAAATCTCGTTGAGCGCTTCTCAGGCGAGGTGCAGATCCCC-GAGGCCCGCTG 44267
Query 94617 CTTCTATGCGTATCAGTGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCA 94675
|||||| | | ||| |||| ||| ||| | || || || ||| || |
Sbjct 44268 CTTCTACGGTTTCCAGA-TCATGATGGAAAACATCCACTCTGAAACCTACTCGCTGCTGA 44326
Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAG 94735
| |||| || || ||||| | || | | || || | ||||| | ||
Sbjct 44327 TTGACACCTACATCAAGGAGCCCTCGCAGCGCACATACCTGTTCAATGCCATTGACACTA 44386
Query 94736 TTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTCGC 94792
|||| || || | || || || |||||| |||||||| | |||| |||||
Sbjct 44387 TTCCCTGCATCCGCCGCAAGGCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTCGA 44446
Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852
| ||||| |||| || | || ||||| ||| ||||| ||||| ||||| ||
Sbjct 44447 ---CGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGGCG 44503
Query 94853 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912
||||| | | || | |||||| ||||| ||||||||||| ||||| |||||| |
Sbjct 44504 CCTTCGCCTCCATCTTCTGGCTCCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAA 44563
Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|||||||||| |||||||| ||||| || ||| || |||||
Sbjct 44564 ACGAGCTTATTTCTCGTGATGAGGGCCTGCACACCGACTTTGC 44606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583253655055200
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