Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq116 194 2e-44 seq105 107 2e-18 >seq116 Length=83673 Score = 194 bits (214), Expect = 2e-44 Identities = 1104/1741 (63%), Gaps = 47/1741 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACA---TTGATTCT 104278 || ||| ||||| | ||||| || || | |||||| ||||| |||| | ||| | Sbjct 77024 CCCCAGCACATGATAATGCGTGTTGCTGTGGGTATT--TGGGGT-GACAAAGTCGATCGT 76968 Query 104279 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 104336 || | || || ||| || ||||| |||| | | ||| ||||||| |||| || | Sbjct 76967 GTGCTTGAAACCTACAACCTTATGTCTAGCAAGTTCT--TCACTCACGCATCACCTACGC 76910 Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396 |||| ||||| ||||| || | || |||| || ||||| ||| || |||| Sbjct 76909 TCTTTAATGCCGGTACTCCCCAGGCTCAGTTGTCTTCATGTTTCCTAGTCGACATGAAGG 76850 Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 104456 | ||| ||| | || || || | || || | | ||||| || || ||| || Sbjct 76849 ATGACAGCATCGAGGGCATTTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGG 76790 Query 104457 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGA 104516 |||| ||||| || | | | || | | | |||| | ||| ||| || | Sbjct 76789 CTGGTGGTATCGGTCTCAATGTTCACCGTATTCGTGCCACTGGCTCTTACATTGCTGGCA 76730 Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576 | || ||| || | || || |||| ||||| || || || ||| ||| || || | Sbjct 76729 CTAACGGTACTTCGAACGGCATCGTTCCCATGCTACGTGTTTTCAACAACACCGCCCGTT 76670 Query 104577 ATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 |||| | || | ||| ||| ||| | | || | ||||| |||||||||| Sbjct 76669 ATGTTGACCAGGGTGGAAACAAGCGACCTGGAGCCTTTGCCATTTATCTCGAGCCATGGC 76610 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 | || ||| || | |||||||| || || || ||||| || | || || | || | Sbjct 76609 ATGCTGATGTCTTCGAGTTCCTCGACTTACGCAAGAACCACGGAAAGGAAGAAGTCCG-T 76551 Query 104694 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 || || || || |||| || || ||||| || | ||||||||| | |||||| || Sbjct 76550 GCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGACTTGTTCATGAAGCGTGTTGAGAAG 76491 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 | || | ||| ||||| | || || | || || || | | | | ||| | || Sbjct 76490 AATGAGGACTGGACTCTCATGTGCCCCAATGAATGCCCCGGCT-TGGCGGATTGCTATGG 76432 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGT 104871 || |||||||| || || || |||||||||| | || ||||| | | | || | | Sbjct 76431 CGAAGAGTTTGAGGCTCTGTATGAAAAGTACGAGAAGGAGGGTCGCG-GTC-GCATGGTT 76374 Query 104872 GCCAGCTGCCG--ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | || || | ||||| | || ||||| || |||| || |||||||| | || Sbjct 76373 GTCAAGGCCCAGAAACTGTGGTATGCCATTCTGGAGGCTCAGACTGAGACTGGCAACCCT 76314 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 | ||||| ||||||||| ||| |||| ||||| ||||| || ||| | ||| || Sbjct 76313 TTTATGCTCTACAAAGACCACTGCAACCGCAAGAGCAATCAGAAAAATCTAGGTACCATT 76254 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 ||||| || || || || || || | || | | | |||||| |||||| Sbjct 76253 CGCAGTTCGAACCTGTGCACTGAGATTATCGAGTACTGTGCCCCTGATGAGGTCGCTGTG 76194 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--TTTG 105107 || ||||| ||||| | || || || | ||||| | | | |||| | | || Sbjct 76193 TGCAACCTAGCATCTCTAGCCCTTCCTTCCTTCGTGGA-CTACA-ACAAGGGTGAGTATG 76136 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 | | | |||| || |||||||| || || ||| ||||||||| | | || | Sbjct 76135 ACTTTAAAAAGCTACACGAAGTCACCCAAGTTGTTGTTCGCAACCTAAACCGCATCATCG 76076 Query 105168 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 || ||| ||||| || || |||| || || ||| | |||||||| |||| Sbjct 76075 ATGTGAATCACTACCCTGTCCAGGAAGCTCACAACAGCAACATGCGCCACCGTCCCATTG 76016 Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCG 105287 || ||||||| ||||| || || || | ||| || | ||| | ||||| ||| Sbjct 76015 GTGTCGGTGTACAGGGCCTGGCTGACGCTTTCCTTGCTCTCCGCATGCCTTTTGAATCCC 75956 Query 105288 ACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGG 105347 ||||| | |||| || || ||||| ||||| || |||||||| || | Sbjct 75955 CTGAAGCACGCCAGCTCAACAAGCAGATTTTTGAAACCATCTACCACGCCGCACTAACTG 75896 Query 105348 CGAGTTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404 | |||| || | || || || ||| | || ||| | |||||||||||| | Sbjct 75895 C---TTCAATGGAAATCGCCCAGACGGAGGGTACTTACTCAACTTATGAGGGTTCTCCTG 75839 Query 105405 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT-TCACTACGAC 105463 || ||||| | | || |||||||||||||| | ||| || || || | ||| Sbjct 75838 TCTCCCAAGGCATCTTGCAGTTTGATATGTGGGATG-TGACTCCTAGTGATCTGTGGGAC 75780 Query 105464 TGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 ||| |||| ||||| || ||| || | ||| | || || ||| || | || Sbjct 75779 TGGACTTCTCTAAAGGAGAAGATTAAGCAGCATGGTGTACGCAATTCTCTTCTAGTTGCA 75720 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583 || ||||| |||||| ||| | || || |||| || ||||| ||||| ||||||||| Sbjct 75719 CCCATGCCTACAGCCAGCACGTCGCAGATTCTGGGCAACAATGAGTGCTTCGAACCCTAC 75660 Query 105584 ACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT 105643 || | ||||| || | | | | || || || ||||| | | |||||| Sbjct 75659 ACATCCAACATTTACCAGCGCCGCGTTCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGG 75600 Query 105644 CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTG 105703 ||| | |||||| || ||||| | ||||| | |||||||| ||| || | Sbjct 75599 CTCCTACGTGACCTAGTCGATCTTGGTTTATGGTCTGACAATATGAAGAATCGCA---TT 75543 Query 105704 AAAGCGG---GTGGTTCCATTCAAAATAT-TGTGGATATTCCAAATGAAATTAAGAAGTT 105759 | |||| ||| |||||||| || || | | | ||||| ||| ||||| | Sbjct 75542 ATTGCGGACAATGGCTCCATTCAGAACATCTCTAG-CATTCCTGCTGATATTAAAGCTCT 75484 Query 105760 GTACCGCACAGTTTGGGAAAT---CAAGATGAAGGATGTCATTGACATGGCCGCAGATCG 105816 |||| || |||||||| || | || | | || | | ||||| || ||||| Sbjct 75483 GTACAAGACCGTTTGGGAGATTTCCCAGCGTACAGTTG---TGCAAATGGCTGCTGATCG 75427 Query 105817 TGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTC 105876 |||| |||||||| ||| || | | || | |||| || ||| || ||| Sbjct 75426 TGGTGCTTTCATTGACCAATCGCAGTCTCTAAACATTCACATGAAAGATCCTACCATGGG 75367 Query 105877 CAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTA 105936 |||| || | |||||| | | ||||| |||||||| ||||| ||||| || Sbjct 75366 CAAGATCACCAGCATGCACTTTGCTGGCTGGAAACTAGGTCTCAAGACGGGCATGTACTA 75307 Query 105937 C 105937 | Sbjct 75306 C 75306 >seq105 Length=86313 Score = 107 bits (118), Expect = 2e-18 Identities = 343/523 (66%), Gaps = 13/523 (2%) Strand=Plus/Plus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 94497 ||||||||||| ||| | ||||| || |||||| | |||| ||||| | ||| || Sbjct 44089 TGGACTGCTGAGGAGATTGATCTGTCTAAGGATCTCCACGACTGGAACAACCGTCTGAAC 44148 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 || | || || | ||||| |||| || || |||||||||| || ||||| || Sbjct 44149 AAAGACGAGCAGTACTTCATCTCCCACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATC 44208 Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616 || || ||| || | | ||| | | |||||||| |||| | || || | | Sbjct 44209 GTCAACGAAAATCTCGTTGAGCGCTTCTCAGGCGAGGTGCAGATCCCC-GAGGCCCGCTG 44267 Query 94617 CTTCTATGCGTATCAGTGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCA 94675 |||||| | | ||| |||| ||| ||| | || || || ||| || | Sbjct 44268 CTTCTACGGTTTCCAGA-TCATGATGGAAAACATCCACTCTGAAACCTACTCGCTGCTGA 44326 Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAG 94735 | |||| || || ||||| | || | | || || | ||||| | || Sbjct 44327 TTGACACCTACATCAAGGAGCCCTCGCAGCGCACATACCTGTTCAATGCCATTGACACTA 44386 Query 94736 TTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTCGC 94792 |||| || || | || || || |||||| |||||||| | |||| ||||| Sbjct 44387 TTCCCTGCATCCGCCGCAAGGCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTCGA 44446 Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852 | ||||| |||| || | || ||||| ||| ||||| ||||| ||||| || Sbjct 44447 ---CGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGGCG 44503 Query 94853 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912 ||||| | | || | |||||| ||||| ||||||||||| ||||| |||||| | Sbjct 44504 CCTTCGCCTCCATCTTCTGGCTCCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAA 44563 Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||||| |||||||| ||||| || ||| || ||||| Sbjct 44564 ACGAGCTTATTTCTCGTGATGAGGGCCTGCACACCGACTTTGC 44606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583253655055200