Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq116 351 1e-91 seq105 183 3e-41 >seq116 Length=83673 Score = 351 bits (388), Expect = 1e-91 Identities = 880/1328 (66%), Gaps = 28/1328 (2%) Strand=Plus/Plus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566 ||||||||| || || |||||| |||| ||||||| ||||| || ||||| ||| Sbjct 75618 GAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAGGGTTCGAAGCACTC 75677 Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626 ||||| |||| ||||| | || ||| || ||||||||||| || || |||||||| Sbjct 75678 ATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAACTAGAAGAGAATT 75737 Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAGG------CCGTCCCAAAATTCATTCGC 78680 || | ||||||| ||| |||| ||||||| | |||||| | ||| | | Sbjct 75738 GCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAGTCCCACAGATCACTAGG 75797 Query 78681 CGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGT 78740 | | ||||||| || || | ||| || | ||| | || || |||| | || Sbjct 75798 AGTCACATCCCACATATCAAACTGCAAGATGCCTTGGGAGACAGGAGAACCCTCATAAGT 75857 Query 78741 CTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACAC 78800 ||||| |||||| || ||||| ||| ||| | || || |||||||| | Sbjct 75858 TGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGAT 75917 Query 78801 AGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAG 78860 | || || || ||||||||||| ||| || | | || || | | || ||| Sbjct 75918 GGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTTCAGGGGATTCAAAAGGCATGCGGAG 75977 Query 78861 CATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTT 78920 | ||| | || ||||||||||| || |||| | | || || |||||||||||||| Sbjct 75978 AGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAATGGGACGGTGGCGCATGTT 76037 Query 78921 GCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACG 78980 ||| || | || ||| | ||||| ||| |||||||| |||||| ||||| || Sbjct 76038 GCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACATCGATGATGCGGTTTAGGTTGCG 76097 Query 78981 CGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTCCTT--TG--- 79035 || || | || || |||| | || || ||| | | | |||| || Sbjct 76098 AACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCATACTCAC--CCTTGTTGTAG 76155 Query 79036 ---ATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTA 79092 | ||| | || ||| || ||||| ||||||||||| || ||| || ||| | Sbjct 76156 TCCACGAAGGAAGGAAGGGCTAGAGATGCTAGGTTGCACACAGCGACCTCATCAGGGGCA 76215 Query 79093 GAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTG--ATGGTGCCGATGTTCTTCT 79150 | |||||| || || ||||||| || || ||| ||||| || | || |||| Sbjct 76216 CAGTACTCGATAATCTCAGTGCACAGGTTCGA--ACTGCGAATGGTACCTAGATTTTTCT 76273 Query 79151 GGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCT 79210 | |||||||| ||| ||| ||| |||||| ||| | || | || |||||| || Sbjct 76274 GATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCT 76333 Query 79211 GACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCT 79270 || || |||| | | | ||| | | | ||||| ||||||| | ||||||| Sbjct 76334 GAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTGACAACCATGCGACCGCGACCCT 76393 Query 79271 GTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCG 79330 ||||| | |||| | | || | || |||||| ||| | || ||| | Sbjct 76394 CCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGG 76453 Query 79331 GGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGA 79390 |||| || | |||||||| || ||||||||| | ||||||||| || |||||| | Sbjct 76454 GGCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTCTTCTCAACACGCTTCATGAACA 76513 Query 79391 GGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGT 79450 ||| ||||||||||||| ||| ||||| || ||| | || || | || |||| Sbjct 76514 AGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGT 76573 Query 79451 TCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGA 79510 || || | ||||| || || | || || || ||||| ||||| ||||| ||||| | Sbjct 76574 TCTTGCGTAAGTCGAGGAACTCGAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAA 76633 Query 79511 ACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTC 79570 | | || |||||| || ||||||| || || ||||| |||||||||||||| | Sbjct 76634 AGGCTCCAGGTCGCTTGTTTCCACCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACAC 76693 Query 79571 GGAGCATGGGCACGATGCCGTCGGCGACG--CCGTTCGTCCCGTTGATTCGTGTACCGCT 79628 | |||||||| |||||||||| ||| | ||||| || || || | || | Sbjct 76694 GTAGCATGGGAACGATGCCGT--TCGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGT 76751 Query 79629 CGCCCGAAT--GTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCG 79686 || ||||| | | || || | || ||||| || || | | |||||| || || Sbjct 76752 GGCACGAATACGGT-GAACA-TTGAGACCGATACCACCAGCCATCTTGGAAATCATGGCA 76809 Query 79687 CACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAG 79746 || |||||| || ||||| ||||||||||| ||| |||||||| |||| ||||| Sbjct 76810 CAAGTCTTGAGGGTATCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCGACTAGGAAA 76869 Query 79747 CAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTG 79806 || |||| ||| | | | |||||||| || ||||| || || | ||||| ||| Sbjct 76870 CATGAAGACAACTGAGCCTGGGGAGTACCGGCATTAAAGAGCGTAGGTGATGCGTGAGTG 76929 Query 79807 AAGAACTT 79814 |||||||| Sbjct 76930 AAGAACTT 76937 Score = 221 bits (244), Expect = 1e-52 Identities = 868/1354 (64%), Gaps = 32/1354 (2%) Strand=Plus/Minus Query 19166 GAGACATACGACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAA 19224 || || ||| |||| ||| | || ||||||||||| ||||| | || || || || || Sbjct 76961 GAAACCTACAACCTTATGT-CTAGCAAGTTCTTCACTCACGCATCACCTACGCTCTTTAA 76903 Query 19225 CGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAG 19284 |||||||| | | | ||| |||| ||||||||||| | |||||||||||||| Sbjct 76902 TGCCGGTACTCCCCAGGCTCAGTTGTCTTCATGTTTCCTAGTCGACATGAAGGATGACAG 76843 Query 19285 CATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGG 19344 ||| |||||||| ||||| || |||||| || || || |||||| | | || || Sbjct 76842 CATCGAGGGCATTTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGGTGG 76783 Query 19345 TATCGGGATCCACTGCTCGAA-TATCCGGTCGAGTGGTACACGAATCAATGGGACGAACG 19403 |||||| || | || || ||| || | | ||| | || ||| || |||| Sbjct 76782 TATCGGTCTCAA-TGTTCACCGTATTCGTGCCACTGGCTCTTACATTGCTGGCACTAACG 76724 Query 19404 GAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCA 19463 | | |||| ||||| || ||||| || || ||||||||||| ||| | || || Sbjct 76723 GTACTTCGAACGGCATCGTTCCCATGCTACGTGTTTTCAACAACACCGCCCGTTATGTTG 76664 Query 19464 ACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGG 19523 ||||||| || ||| || || | || ||||| || |||||||||||||| || | Sbjct 76663 ACCAGGGTGGAAACAAGCGACCTGGAGCCTTTGCCATTTATCTCGAGCCATGGCATGCTG 76604 Query 19524 ACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCG 19583 | ||| | || |||||||| | ||| |||||| || | || || | || ||| | Sbjct 76603 ATGTCTTCGAGTTCCTCGACTTACGCAAGAACCACGGAAAGGAAGAAGTCCGTGCTCGTG 76544 Query 19584 ACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAG 19643 |||| ||| |||| ||||||| ||| | |||||| || ||||||||| | || | Sbjct 76543 ACCTATTCTTGGCCCTGTGGATCTGCGACTTGTTCATGAAGCGTGTTGAGAAGAATGAGG 76484 Query 19644 AATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGT 19703 | ||| || |||||||| | |||||||| ||| | | || ||| ||||| | || Sbjct 76483 ACTGGACTCTCATGTGCCCCAATGAATGCCCCGGCTTGGCGGATTGCTATGGCGAAGAGT 76424 Query 19704 TCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCG-GTTCAAGAAGGTGGTCCGGGCC 19762 | | | |||| | |||| |||| || | || | ||| ||| |||| Sbjct 76423 TTGAGGCTCTGTATGAAAAGTACGAGAAGGAGGGTCGCGGTC-GCATGGTTGTCAAGGCC 76365 Query 19763 CGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGC 19822 | | | | ||| | | | || | ||| ||||| |||| || | ||| | Sbjct 76364 CAGAAACTGTGGTATGCCATTCTGGAGGCTCAGACTGAGACTGGCAACCCTTTTATGCTC 76305 Query 19823 TACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGAT--CAAGTCGT 19880 ||||| ||| | ||| |||| |||||||| || | || | || ||| | Sbjct 76304 TACAAAGACCACTGCAACCGCAAGAGCAATCAGAAAAATCTAGGTACCATTCGCAGT--T 76247 Query 19881 CCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATC 19940 | |||||||| ||||| || || ||| | || || ||| || ||||| || | Sbjct 76246 CGAACCTGTGCACTGAGATTATCGAGTACTGTGCCCCTGATGAGGTCGCTGTGTGCAACC 76187 Query 19941 TGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCC---------TTCGACTTTG 19991 | || || || ||| || | ||||| || || | | | |||||| Sbjct 76186 TAGCATCTCTAGCCCTTCCTTCCTTCGT---GGACTACAACAAGGGTGAGTATGACTTTA 76130 Query 19992 CCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGA 20051 || | |||| || |||| || || || || || || ||| |||||||| || Sbjct 76129 AAAAGCTACACGAAGTCACCCAAGTTGTTGTTCGCAACCTAAACCGCATCATCGATGTGA 76070 Query 20052 ACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCG 20111 | ||||| | ||| || | ||| || ||||||||||| || || | ||| Sbjct 76069 ATCACTACCCTGTCCAGGAAGCTCACAACAGCAACATGCGCCACCGTCCCATTGGTGTCG 76010 Query 20112 GCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCC--AA 20169 | || ||||||||||| |||| |||| | ||| || | | || || ||||| | Sbjct 76009 GTGTACAGGGCCTGGCTGACGCTTTCCTTGCTCTCCGCATGCCTTTTGA--ATCCCCTGA 75952 Query 20170 GGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATC 20229 || ||| ||||||||||| || || || || | |||||||| || || | || Sbjct 75951 AGCACGCCAGCTCAACAAGCAGATTTTTGAAACCATCTACCACGCCGCACTAACTGCTTC 75892 Query 20230 GTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGA 20289 ||| ||||| | ||| || | ||| || | |||| || || | ||| | Sbjct 75891 AATGGAAATCGCCCAGACGGAGGGTACTTACTCAACTTATGAGGGTTCTCCTGTCTCCCA 75832 Query 20290 GGGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGA------GTTTTGGAGCGC 20343 || ||| | ||| || ||||||| || ||| | ||| | |||| | Sbjct 75831 AGGCATCTTGCAGTTTGATATGTGGGATGTGACTCCTAGTGATCTGTGGGACTGGACTTC 75772 Query 20344 CCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCC 20403 || |||| |||| ||| || || | ||||| || | || || || |||||||| Sbjct 75771 TCTAAAGGAGAAGATTAAGCAGCATGGTGTACGCAATTCTCTTCTAGTTGCACCCATGCC 75712 Query 20404 GACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAA 20463 || ||| || | ||||| |||| ||||| ||| ||||| || ||||| |||| Sbjct 75711 TACAGCCAGCACGTCGCAGATTCTGGGCAACAATGAGTGCTTCGAACCCTACACATCCAA 75652 Query 20464 CATCTACTTGCGTCGTACACTGGCCGGTGAGTTC 20497 ||| ||| ||| || || || || |||||| Sbjct 75651 CATTTACCAGCGCCGCGTTCTTGCTGGCGAGTTC 75618 >seq105 Length=86313 Score = 183 bits (202), Expect = 3e-41 Identities = 553/830 (67%), Gaps = 42/830 (5%) Strand=Plus/Plus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAA---G 59669 || |||||| | | ||||||||||| || | || || | || ||| |||| Sbjct 44083 TCCTTCTGGACTGCTGAGGAGATTGATCTGTCTAAGGATCTCCACGACTGGAACAACCGT 44142 Query 59670 CTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGAT 59729 || || | ||||||||| | |||||| | || |||||||| || || |||| Sbjct 44143 CTGAACAAAGACGAGCAGTACTTCATCTCCCACATTCTTGCCTTCTTTGCTGCCTCTGAT 44202 Query 59730 GGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAG--GATGTCCAGATTGCCGAGG 59787 || || || | |||||| | | ||| | ||| || || || ||||| |||||| Sbjct 44203 GGCATCGTCAACGAAAATCTCG--TTGAGCGCTTCTCAGGCGAGGTGCAGATCCCCGAGG 44260 Query 59788 CCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGC 59847 |||| | ||||||| | ||| | | || |||||||| || || ||||||| Sbjct 44261 CCCGCTGCTTCTACGGTTTCCAGATCATGATGGAAAACATCCACTCTGAAACCTACTCGC 44320 Query 59848 TCATGATCGATAAGTTGGTCAAGGATCC--GGAAGAGAAGGCTGGTCTGTTCCGTGCCAT 59905 | |||| || | | ||||||| || | || | | | |||||| |||||| Sbjct 44321 TGCTGATTGACACCTACATCAAGGAGCCCTCGCAGCGCA--CATACCTGTTCAATGCCAT 44378 Query 59906 AGAGAC-GTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGA--GTCC 59962 || || | ||| ||| | | || || || ||||| || ||||||| | | | Sbjct 44379 TGACACTATTCCCTGCA-TCCGCCGCAAGGCCGACTGGGCTCTGAAGTGGATCACCGACA 44437 Query 59963 TGGAG-CATCATTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTC 60020 |||| | | ||||| || || || | || ||||| ||| || || || ||||| ||| Sbjct 44438 AGGAGTCGACGTTTGCCCAGCGCCTAGTTGCCTTTGC-TGCTGTCGAGGGCATCTTTTTC 44496 Query 60021 TCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGT 60080 || ||| | ||| | || ||||||||| |||||||| |||||||| || |||| Sbjct 44497 TCAGGCGCCTTCGCCTCCATCTTCTGGCTCCGCAAGCGTGGTCTCATGCCTGGTCTGACC 44556 Query 60081 TTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCT 60139 ||||| |||||||| ||||| || || |||||||| || || ||||| || | ||| Sbjct 44557 TTCTCAAACGAGCTTATTTCTCGTGATGAGGGCCTGCACACCGACTTTGC-TTGCCTGCT 44615 Query 60140 CTATTCACACCTATTGGAAAAATGCCCTTCCAAGGA---TATTCACAAGATTGTTCAGTG 60196 | || || | || | || |||| |||||| | | || |||| | ||| || Sbjct 44616 GTTCTCGCATC---TGAACAACCGCCCCAGCAAGGACCTTGTGCAAAAGA-TCATCACTG 44671 Query 60197 -GGC--TTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGG 60253 || | |||| | |||| |||||| | || || || || || ||| || |||| Sbjct 44672 ATGCCGTCGTGA--TCGAGAAGGAGTTCCTGACCGAGGCTCTGCCCTGCGGTCTGCTAGG 44729 Query 60254 TATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGCCT-CATG--GC 60310 ||| |||||| |||| |||||||||| ||||||| || |||||||| | || || Sbjct 44730 AATGAACGCTGATCTGATGAAGCAGTACATTGAGTTTGTTGCTGACCGCCTGCTTGTTGC 44789 Query 60311 CC--AGTTTGGAGAAGGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACC 60368 | | ||||||| | ||| | | | ||||| ||||||| ||||||| | Sbjct 44790 TCTAGGCAACGAGAAGG-----TGTACCGTGCCACAAACCCCTTCGACTTCATGGAGAAC 44844 Query 60369 ATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 |||||| | | || ||||| ||||||||||||||||| ||||| || || Sbjct 44845 ATCTCGCTCGGCGGCAAGACTAACTTCTTTGAGAAGCGTGTCGGCGACTA 44894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548518080571200