Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq116 260 2e-64 seq28 185 1e-41 seq100 145 9e-30 seq61 145 9e-30 seq161 91.5 2e-13 >seq116 Length=83673 Score = 260 bits (288), Expect = 2e-64 Identities = 1132/1760 (64%), Gaps = 69/1760 (4%) Strand=Plus/Plus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| |||| || | |||||||||||||||||||| || |||||||| | |||| Sbjct 75292 GCCTGCGTACGTAAGTAGTACATGCCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGC 75351 Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151 || ||| ||| | | || || | | |||| ||||| |||||||| || || Sbjct 75352 ATGCTGGTGATCTTGCCCATGGTAGGATCTTTCATGTGAATGTTTAGAGACTGCGATTGG 75411 Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCAT 80211 |||||||| |||||||| || ||||||| | || || || | ||| ||||| Sbjct 75412 TCAATGAAAGCACCACGATCAGCAGCCATTTGCACAACTGTACGCTGGGAAATCTCCCAA 75471 Query 80212 ACTGTACGATACAC--CTTACGAAGCTCCTCTGGAATG-TCCAGATTTT--GCACACTGC 80266 || || |||| ||| || || | |||||| | |||| || | | || Sbjct 75472 ACGGTCTTGTACAGAGCTTT--AATATCAGCAGGAATGCTAGAGATGTTCTGAATGGAGC 75529 Query 80267 CACCGTCCTTTACAATTTGATTTTTCA-ATT--CAGACGTCCAGACACCAAGCTTGTGCA 80323 || |||| | ||| |||| |||| ||| ||||| || | |||||| | | | Sbjct 75530 CATTGTCCGCAATAATGCGATTCTTCATATTGTCAGAC---CATAAACCAAGATCGACTA 75586 Query 80324 GATCTTTCACA-AGGTGCTTGTTAATCATGACA---AACTCTCCCGCGAGGGTGCGACGC 80379 | || || ||| || | | | ||| ||||| || || || ||| ||| Sbjct 75587 GGTC----ACGTAGGAGCCAGGGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGC 75642 Query 80380 AGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTG 80439 | || | ||| | ||||| || || || ||| ||||| || || ||||| | |||| Sbjct 75643 TGGTAAATGTTGGATGTGTAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTG 75702 Query 80440 CTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCC 80499 || || || ||||| || | || | || ||||| || | || |||| ||| || | | Sbjct 75703 CTGGCTGTAGGCATGGGTGCAACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTC 75762 Query 80500 TC-----GCGCAAATCTGACCAAAA-ATCAACCCCAACGCTGTGAC--CCCACATGTCGT 80551 || | | | | | || | | |||| | | | || || ||||||| || Sbjct 75763 TCCTTTAGAGAAGTCCAGTCCCACAGATCA----CTAGGA-GTCACATCCCACATATCAA 75817 Query 80552 GCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCT 80611 |||||||||||| | || | ||||| ||| | | || ||| | |||||||||| Sbjct 75818 ACTGCAAGATGCCTTGGGAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCT 75877 Query 80612 TGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGT 80671 ||| | || || | | || || ||||| || ||| ||||| | ||||| Sbjct 75878 GGGCGATTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGT 75937 Query 80672 TCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCA 80731 | | ||| || | ||| || || | || || | | ||| ||||||||| Sbjct 75938 TGAGCTGGCGTGCTTCAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCA 75997 Query 80732 GGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGA 80790 ||||||| || |||| | || || ||||||||| |||| | | | | || ||| | Sbjct 75998 GGCCCTGTACACCGACACCAATGGGACGGTGGCGCATGTTGCTGTTG-TGAGCTTCCTGG 76056 Query 80791 ATTGGGTAAAAGTTATT---ATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTA 80847 | ||||| || ||| |||||||| |||||| |||||||| |||||| | || Sbjct 76057 ACAGGGTA---GTGATTCACATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTG 76113 Query 80848 ACATCATGAAGTTTCTGAAAGTCGAATTG------GTTCCCCTTCACAAATGCCGGAAGG 80901 || || || || || | |||||| | | ||| | ||| || | |||||| Sbjct 76114 ACTTCGTGTAGCTTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGG 76173 Query 80902 CTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAG---CATCTGTAAACTCGACGATT 80958 || || || || |||||||| || ||||| |||| || | ||| ||||| || Sbjct 76174 GCTAGAGATGCTAGGTTGCACACAGCGACCTCATCAGGGGCA-CAGTA--CTCGATAATC 76230 Query 80959 TCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTG 81018 || ||||||| || ||| ||| ||||| || |||||||| || |||| |||| Sbjct 76231 TCAGTGCACAGGTTCGAACTGCGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTG 76290 Query 81019 CAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCG 81078 || ||| |||||| ||| | ||| | || ||||| ||| | || || ||||| Sbjct 76291 CAGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCA 76350 Query 81079 TCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCG 81138 | ||| | | | |||||||| ||| |||| || || | | ||||| | Sbjct 76351 TACCACAGTTTCTGGGCCTTGACAACCATGCGACCGCGACCCTCCTTCTCGTACTTTTCA 76410 Query 81139 TAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCAC 81198 || | || |||| | || | || | | | | ||||| || || |||||| Sbjct 76411 TACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCAC 76470 Query 81199 ATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGG 81258 || || |||||| | ||||| ||| ||||||||| ||| |||||| ||| Sbjct 76471 ATGAGAGTCCAGTCCTCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGG 76530 Query 81259 GCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAG 81317 || ||| ||||| || ||| || | || || | || ||||| ||| || ||||| Sbjct 76531 GCCAAGAATAGGTCACGAGCA-CGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAG 76589 Query 81318 AAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG 81377 || || | || || |||||||||||||| ||||| | ||| | | || || Sbjct 76590 GAACTCGAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTT 76649 Query 81378 G---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGAT 81434 | |||||||||| || |||||||| || ||| || ||||| | ||| || | ||| Sbjct 76650 GTTTCCACCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGAT 76709 Query 81435 ACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG--CACCTTGCTG 81492 || | || |||||| || || | || || || |||| || || || Sbjct 76710 GCCGTTCGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAAC 76769 Query 81493 ATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCA 81552 |||| |||||||| ||||| | | ||| |||||| ||||| || | ||| || Sbjct 76770 ATTG--AGACCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCG 76827 Query 81553 TAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGG 81612 ||||| ||||||||||| || | |||||||| | | |||||| |||| |||| | Sbjct 76828 TAAATGCCCTCGATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGA--G 76885 Query 81613 CTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACA 81670 | | ||| |||||||| || || || || | |||||| |||| | | | |||| Sbjct 76886 CCTGGGGAGTACCGGCATTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTAGACA 76945 Query 81671 TCAGGTCATAGGTTTCCTTGACGCG-TGGAATATCGTCACCGTGAATACCGATAGCTACA 81729 | |||| |||||||| || || | || | | |||||| |||||| | ||| ||| Sbjct 76946 TAAGGTTGTAGGTTTCAAGCACACGATCGACT-TTGTCACCCCAAATACCCACAGCAACA 77004 Query 81730 CGCATAAACATGTACTGGGG 81749 ||||| | ||||| |||||| Sbjct 77005 CGCATTATCATGTGCTGGGG 77024 >seq28 Length=151797 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| | || |||||||| ||||| || || || ||||| | Sbjct 108550 ATGCAAATCTTCGTCAAGACCTTGACGGGCAAGACCATTACCCTCGAAGTCGAGTCCTCT 108609 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | ||| | || || ||||| |||||||| || || || || ||| Sbjct 108610 GATACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCCCCGGATCAG 108669 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||||||||| ||||| |||||||||| |||||||| | ||||| || Sbjct 108670 CAGCGTCTCATTTTTGCTGGAAAGCAGCTCGAGGATGGCCGTACCCTGTCGGACTACAAC 108729 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || ||||| |||||||| | || ||||||| || ||||| Sbjct 108730 ATTCAGAAAGAATCTACTCTTCACTTGGTTCTGCGTCTGCGTGGTGG 108776 Score = 181 bits (200), Expect = 1e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| | || |||||||| ||||| || || || ||||| | Sbjct 108778 ATGCAAATCTTCGTCAAGACCTTGACGGGCAAGACCATTACCCTCGAAGTCGAGTCCTCT 108837 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | ||| | || || ||||| |||||||| || ||||| |||||| Sbjct 108838 GATACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCCGACCAG 108897 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| || ||||||| || ||||| | ||||| || Sbjct 108898 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 108957 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| || |||||||| | || ||||||| || ||||| || Sbjct 108958 ATCCAGAAGGAGTCTACTCTTCACTTGGTTCTGCGTCTGCGTGGTGGCCA 109007 Score = 176 bits (194), Expect = 5e-39 Identities = 169/217 (78%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 27416 TTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTG 27475 |||||||||| |||||||| ||||| ||||| || || || ||||| || | ||||| Sbjct 108332 TTGTCAAGACCCTTACCGGAAAGACCATTACCCTCGAAGTCGAGTCCTCCGACACCATTG 108391 Query 27476 CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAA 27535 || | ||| | || || |||||||||||||| |||||||| |||||||||||||| | Sbjct 108392 ACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGTCTCA 108451 Query 27536 TTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595 | || ||||| ||||| || ||||||| |||||||| | ||||| || | || || | Sbjct 108452 TCTTCGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTTTCCGACTACAACATTCAGAAAG 108511 Query 27596 AATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| | ||| ||||||| || ||||| Sbjct 108512 AATCTACTCTTCACTTGGTCCTGCGTCTGCGTGGTGG 108548 Score = 145 bits (160), Expect = 9e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || || ||||| ||||| |||| |||| || | ||| || Sbjct 108062 ACTGGCAAGACCATCACCCTCGAGGTGGAGTCCTCGGATACTATTGACAACGTTAAGTCT 108121 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| || ||||| |||||||||||||| || || ||||| ||| Sbjct 108122 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGTCTCATCTTCGCTGGAAAG 108181 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||||| || ||||| | ||||| || | || ||||| || ||||| ||| Sbjct 108182 CAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCTACTCTCCAT 108241 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| | || || || ||||| Sbjct 108242 CTAGTGCTCCGCCTGCGTGGTGG 108264 >seq100 Length=89839 Score = 145 bits (160), Expect = 9e-30 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| ||||| || ||||| ||||| || ||||||||||| Sbjct 17022 ATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTCG 17081 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || ||||||||||||||||| ||||| || |||||| Sbjct 17082 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 17141 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| ||||| || ||||||| |||||||| | ||||| || Sbjct 17142 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAAC 17201 Query 27586 GTCCAAAAGG 27595 | || |||| Sbjct 17202 ATTCAGAAGG 17211 >seq61 Length=115161 Score = 145 bits (160), Expect = 9e-30 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || ||||| ||||| || | || Sbjct 22480 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCTTCGGACACGATC 22421 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || |||||||||||||| ||||| || ||||||||||| | Sbjct 22420 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCTTG 22361 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || |||||||||||||| || ||||||| || || || | ||||| || |||| ||| Sbjct 22360 ATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAG 22301 Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||||| || || || ||| |||| || || ||||| Sbjct 22300 GAGTCCACCCTCCACCTTGTCCTGCGCCTGCGTGGTGG 22263 >seq161 Length=64780 Score = 91.5 bits (100), Expect = 2e-13 Identities = 170/247 (69%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 31983 GGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCT-GT 32041 ||| ||| | |||||| ||||| ||||| || ||||| ||| ||| || ||| | || Sbjct 58471 GGATGGCTTTAAGCCTGGTCAGCGGAAGGTCATTTACGCGTGCTTCAGCAAAAACATTGT 58530 Query 32042 CGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACC 32101 | || || |||||||| | ||||| | || | || | | || || |||| || | Sbjct 58531 CCAG-GATATGAAGGTTGTTGAGCTGGCTGGTTTTGTTTCTGGACATACCTCCTACCAAC 58589 Query 32102 ACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAA 32161 |||| || || || || || |||||| | || |||||| ||||||||||| | | Sbjct 58590 ACGGAGAAGCATCCCTACAACAAACCATTATTGGTCTGGCTCAGGACTTTGTCGGTTCCA 58649 Query 32162 ATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGG 32221 | ||| | |||| || ||||| ||| | ||||| | || || || ||||| || Sbjct 58650 ACAACATAAACTGTCTGGAGCCCAGTGGTAACTTTGGTTCGCGTCTTGCTGGTGGTTCGG 58709 Query 32222 ATGCTGC 32228 ||||||| Sbjct 58710 ATGCTGC 58716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570303413697600