Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq3 84.2 2e-11
>seq3
Length=270739
Score = 84.2 bits (92), Expect = 2e-11
Identities = 184/276 (67%), Gaps = 0/276 (0%)
Strand=Plus/Minus
Query 30082 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 30141
||||||||| || || ||||| ||| || |||||||| ||| || |||||
Sbjct 145534 GTGGCACGGTGGCAGCGCCATCTTCTTCAAATCCGCAGGGTTCCAAGCGGTCATAATGAT 145475
Query 30142 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 30201
|||| || | |||||| || ||| || | | | | ||||||||| || ||
Sbjct 145474 ACGCCGATCGTACGGGTTGGTCTTGAGTTTGTGGATGACTTCAGCCAGCTGATCAACACC 145415
Query 30202 CATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAA 30261
|||| ||||||| | | ||| ||||| ||||||||||| | |||||| ||
Sbjct 145414 TTGACCCGTATAGTCTGTCTTGGCATCCACATACTCGGCTCCGAAATGGCGCCACTGAAA 145355
Query 30262 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAA 30321
||||| || || || || || || |||| | ||| | | ||| || || | |||
Sbjct 145354 GCCGTATACAGGCCCTAGATCGCCAACTTCACGGTGGCCTAGACCCGCGTTATCAAGAAA 145295
Query 30322 GTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357
|| | || |||||| | ||||||||||| || ||
Sbjct 145294 CTCGCGCGAGCCGTTGCCATCCCAGATCTTGACACC 145259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406305547130160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |