Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 2e-11 >seq3 Length=270739 Score = 84.2 bits (92), Expect = 2e-11 Identities = 184/276 (67%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 30082 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 30141 ||||||||| || || ||||| ||| || |||||||| ||| || ||||| Sbjct 145534 GTGGCACGGTGGCAGCGCCATCTTCTTCAAATCCGCAGGGTTCCAAGCGGTCATAATGAT 145475 Query 30142 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 30201 |||| || | |||||| || ||| || | | | | ||||||||| || || Sbjct 145474 ACGCCGATCGTACGGGTTGGTCTTGAGTTTGTGGATGACTTCAGCCAGCTGATCAACACC 145415 Query 30202 CATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAA 30261 |||| ||||||| | | ||| ||||| ||||||||||| | |||||| || Sbjct 145414 TTGACCCGTATAGTCTGTCTTGGCATCCACATACTCGGCTCCGAAATGGCGCCACTGAAA 145355 Query 30262 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAA 30321 ||||| || || || || || || |||| | ||| | | ||| || || | ||| Sbjct 145354 GCCGTATACAGGCCCTAGATCGCCAACTTCACGGTGGCCTAGACCCGCGTTATCAAGAAA 145295 Query 30322 GTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357 || | || |||||| | ||||||||||| || || Sbjct 145294 CTCGCGCGAGCCGTTGCCATCCCAGATCTTGACACC 145259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406305547130160