Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq28 109 5e-19
seq100 82.4 7e-11
>seq28
Length=151797
Score = 109 bits (120), Expect = 5e-19
Identities = 156/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 26998 TTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTG 27057
|||| || || || ||||| ||| | ||||| || ||||| || | |||||| | ||||
Sbjct 108332 TTGTCAAGACCCTTACCGGAAAGACCATTACCCTCGAAGTCGAGTCCTCCGACACCATTG 108391
Query 27058 AGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAA 27117
| | ||||| || || || ||||| || ||||| || || || || |||||| | |
Sbjct 108392 ACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGTCTCA 108451
Query 27118 TATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGG 27177
| | ||| || || || | || || | ||| ||||||| ||||||||||| || |
Sbjct 108452 TCTTCGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTTTCCGACTACAACATTCAGAAAG 108511
Query 27178 AGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| || || | || ||||| ||||| |||| ||||| ||
Sbjct 108512 AATCTACTCTTCACTTGGTCCTGCGTCTGCGTGGTGGTAT 108551
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || |||| |||||| | ||||| || ||||| || | ||
Sbjct 108550 ATGCAAATCTTCGTCAAGACCTTGACGGGCAAGACCATTACCCTCGAAGTCGAGTCCTCT 108609
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | ||||| || || || || || || || || || || |||||
Sbjct 108610 GATACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCCCCGGATCAG 108669
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || || || || | || || | ||| | || || ||||||
Sbjct 108670 CAGCGTCTCATTTTTGCTGGAAAGCAGCTCGAGGATGGCCGTACCCTGTCGGACTACAAC 108729
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || || || || | || |||||| ||||| |||| ||||| ||
Sbjct 108730 ATTCAGAAAGAATCTACTCTTCACTTGGTTCTGCGTCTGCGTGGTGGTAT 108779
>seq100
Length=89839
Score = 82.4 bits (90), Expect = 7e-11
Identities = 132/190 (69%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || || ||| | ||||| || || || || | ||
Sbjct 17022 ATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTCG 17081
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||| ||||| || ||||| || || || ||
Sbjct 17082 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 17141
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||| ||||| || |||| || | ||| | || || ||||||
Sbjct 17142 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAAC 17201
Query 27168 ATTCAAAAGG 27177
||||| ||||
Sbjct 17202 ATTCAGAAGG 17211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434913072249600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |