Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq116 235 8e-57 >seq116 Length=83673 Score = 235 bits (260), Expect = 8e-57 Identities = 1188/1867 (64%), Gaps = 51/1867 (3%) Strand=Plus/Plus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 ||||||| |||||||| || || || ||||| || |||| || || |||||||| Sbjct 75298 GTACGTAAGTAGTACATGCCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGCATGCTG 75357 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931 || | ||| ||||||| || ||||| || | ||||| ||| || ||| Sbjct 75358 GTGATCTTGCCCATGGTAGGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATG 75417 Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991 ||||| || | |||||| ||||||| | || || || | ||| ||||||| || Sbjct 75418 AAAGCACCACGATCAGCAGCCATTTGCACAACTGTACGCTGGGAAATCTCCCAAACGGTC 75477 Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCT 77048 ||| | | ||| |||||| | |||| | | | | || |||||||| ||| || Sbjct 75478 TTGTACAGAGCTTTAATATCAGCAGGAATGCTAGAGATGTTCTGAATGGAGCCATTGTCC 75537 Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGG 77108 | ||||| |||||| |||| ||| ||| || || || | | ||| Sbjct 75538 GCAATAATGCGATTCTTCATATTGTCAGACCATAAACCAAGATCGACTAGGTCACGTAGG 75597 Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168 || || || || | || || || |||| | || | || |||||| || Sbjct 75598 AGCCAGGGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGAT 75657 Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228 || || ||||| | | |||||||| |||| ||| || | || || || ||||| Sbjct 75658 GTGTAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATG 75717 Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTT 77287 ||||| || | | | ||| | | |||||| || | | || || || |||||| | | Sbjct 75718 GGTGCAACTAGAAGAGAATTGCGTACACCATGCTGCT-TAATCTTCTCCTTTAGAGAAGT 75776 Query 77288 CCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACT 77347 ||| ||||| ||||| ||| |||||||| | ||| | || | || || || Sbjct 75777 CCAGTCCCACAGATCACTAGGAGTCACATCCCACATATCAAACTGCAAGATGCC-TTGGG 75835 Query 77348 AG-CATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACA---AC 77403 || || || || | ||| ||| |||| || || || | || | ||| || | Sbjct 75836 AGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTC-CATTGAA 75894 Query 77404 TCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTT 77463 | || | ||| ||| || || ||||| ||||||| ||| ||||| | |||||| Sbjct 75895 GCAGTT--AGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTT 75952 Query 77464 CAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAA 77523 || ||||| || | | | || || || || || | ||||| || || | Sbjct 75953 CAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGA 76012 Query 77524 TACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAA 77583 |||||| || | || | | | ||| | | |||||| | | ||| || | ||| | Sbjct 76013 CACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCA 76072 Query 77584 TGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAA 77643 || || || || || || | |||||| |||| || || | ||| || || Sbjct 76073 CATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAA 76132 Query 77644 AATCAAA-TCTTCCATCTATAA---CAAACATGTTCAAAG--CTATAGATGCTAGATTAC 77697 | ||| | || || | | | || | | ||| ||| ||||||||| || | Sbjct 76133 AGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCTAGAGATGCTAGGTTGC 76192 Query 77698 AAACTGCTACCTCATTAGCGTTGGCA---TATTGTATTATCTCGGTACATAGATTACTAC 77754 | || || ||||||| || | ||| || | || ||||| || || || || || Sbjct 76193 ACACAGCGACCTCATCAGGG---GCACAGTACTCGATAATCTCAGTGCACAGGTTCGAAC 76249 Query 77755 ATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAA 77814 || || || ||||||| || |||||||| ||||| ||| || || || | Sbjct 76250 TGCGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCA 76309 Query 77815 TAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTT 77874 |||| || | || || ||| |||| | || | ||| | | ||| | | ||| | Sbjct 76310 TAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACA-GTTTCTGGGCC 76368 Query 77875 TTATCATAGATTTGTATCGCCTCTCTCTTTCA--TA--TTGAGTATATAGCCGTTCAAAT 77930 || || || | | ||| | ||| ||| || || || | |||| ||||| Sbjct 76369 TTGACAACCATGCG-ACCGCGACCCTCCTTCTCGTACTTTTCATACAGAGCC--TCAAAC 76425 Query 77931 TCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCA 77990 || || || | ||| |||| || ||||||||||| |||||||| | | |||||| Sbjct 76426 TCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCC 76485 Query 77991 CCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 78050 ||| | || ||| || ||||| || | || ||||| || || | ||||| || Sbjct 76486 TCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCA 76545 Query 78051 CGGGTTCTATGTTCTTCATTTCCTGTATTCTT-TTTAAGATCGAGAAACTCCATAATATC 78109 || | | |||||| ||||| ||||| |||| ||||| ||||| | | ||| Sbjct 76546 CGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAG-TCGAGGAACTCGAAGACATC 76604 Query 78110 AGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATC 78169 || ||||||||| || ||||| || || | |||||||||| || || || ||||| || Sbjct 76605 AGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCCTGGTC 76664 Query 78170 TATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCC 78229 | ||| | ||||||||| || |||| | | ||| |||| || ||||| || || || Sbjct 76665 AACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCGAAGTACC 76724 Query 78230 ATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATA--TTACTAATGGATATCCCTATT 78287 || || |||| ||| ||| ||| | || |||||| | || || | || || Sbjct 76725 GTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGA--CCGATA 76782 Query 78288 CCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATA 78347 || || |||||||| || || | || ||| || | |||||||| || ||||| || Sbjct 76783 CCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCCCTCGATG 76842 Query 78348 CTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 78407 ||||||||| |||||| | || ||||| ||||| ||| || ||| || ||| Sbjct 76843 CTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGTACCGGCA 76902 Query 78408 TTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 78467 ||||| | || || ||||| || || || | || ||| | || ||||| |||||| Sbjct 76903 TTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTAGACATAAGGTTGTAGGTTTCA 76962 Query 78468 A-TAGCTGAT--TCTATGT---CCCATTGATGAATTCCTACCGCTACACGCATCAACATA 78521 | | ||| || ||| |||| ||| || || || |||||||| | ||| Sbjct 76963 AGCACACGATCGACTTTGTCACCCCA------AATACCCACAGCAACACGCATTATCATG 77016 Query 78522 TGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTT 78581 ||||| || | ||||| ||||| || | ||| | | ||| || || | || Sbjct 77017 TGCTGGGGACGCTCAACAATCTTACCATCAAGTTTGAGTAGGTACGAACGCTCGAGCGTC 77076 Query 78582 TTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTA 78641 ||||| ||||| || | ||| ||||| | ||||| | ||| |||| | || | | Sbjct 77077 TTAAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTACACAATGGCAGAGTCCAGCTCA 77136 Query 78642 TCTTTGT 78648 || |||| Sbjct 77137 TCCTTGT 77143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694660290307200