Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq311 93.3 9e-14
>seq311
Length=88599
Score = 93.3 bits (102), Expect = 9e-14
Identities = 245/362 (68%), Gaps = 24/362 (7%)
Strand=Plus/Minus
Query 319317 ACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTCTCGGTAAGGGCGTA 319376
|||||| ||||| |||||||||||||| | || | ||| | | ||| ||||
Sbjct 83126 ACCCTCAAGGAAACCGGGCTCGGGGAAGGTGAACTCGATCTCGGAGGCACCAAGTTCGTA 83067
Query 319377 GTA--ACTCG-CTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTT 319433
||| ||| | | || ||| | |||||| || ||||||| ||| || || |||
Sbjct 83066 GTATGACTTGGCCGA---GGGGCACTTCTTGACAAACTCGGCCAGGTTACCACGGTAACG 83010
Query 319434 CTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTG-CAAACAGCGTCGAGGAACC 319492
||| ||||| | | | ||||| |||| ||| | | || || || ||| ||||| |
Sbjct 83009 CTTAAGCTTGAAGC---GCTCGTAGTGGACAAT-GTGCTGGCAGACGTTGTCAAGGAAGC 82954
Query 319493 CGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGG----TTGATCAGGTATTCA 319548
| |||||||| || || || | | ||| || | |||| ||| |||||| ||
Sbjct 82953 CAGAGTCGTGAGAGACGATAATG---GAA--GTGC--AAGGAGAGTTGCACAGGTAGTCC 82901
Query 319549 ATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGC 319608
|| |||| | ||||| |||| ||||||||||| ||||||||||||||||| |
Sbjct 82900 TCCAGCCACTTGACGTTCTTCACATCCAGATGGTTGGTAGGCTCGTCAAGAAGCAGGATA 82841
Query 319609 TTTGCGTTCAGGAGCATTGCACGTGCA-AGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667
| | | || | ||||| ||| ||||| || ||||| ||||| || || |||||
Sbjct 82840 TCAGGAGCCTCGAAAACGGCACG-GCACAGAGCCAGCTTCATCTTCCAACCACCAGAAAG 82782
Query 319668 AG 319669
||
Sbjct 82781 AG 82780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057807559762190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |