Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq311 93.3 9e-14 >seq311 Length=88599 Score = 93.3 bits (102), Expect = 9e-14 Identities = 245/362 (68%), Gaps = 24/362 (7%) Strand=Plus/Minus Query 319317 ACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTCTCGGTAAGGGCGTA 319376 |||||| ||||| |||||||||||||| | || | ||| | | ||| |||| Sbjct 83126 ACCCTCAAGGAAACCGGGCTCGGGGAAGGTGAACTCGATCTCGGAGGCACCAAGTTCGTA 83067 Query 319377 GTA--ACTCG-CTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTT 319433 ||| ||| | | || ||| | |||||| || ||||||| ||| || || ||| Sbjct 83066 GTATGACTTGGCCGA---GGGGCACTTCTTGACAAACTCGGCCAGGTTACCACGGTAACG 83010 Query 319434 CTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTG-CAAACAGCGTCGAGGAACC 319492 ||| ||||| | | | ||||| |||| ||| | | || || || ||| ||||| | Sbjct 83009 CTTAAGCTTGAAGC---GCTCGTAGTGGACAAT-GTGCTGGCAGACGTTGTCAAGGAAGC 82954 Query 319493 CGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGG----TTGATCAGGTATTCA 319548 | |||||||| || || || | | ||| || | |||| ||| |||||| || Sbjct 82953 CAGAGTCGTGAGAGACGATAATG---GAA--GTGC--AAGGAGAGTTGCACAGGTAGTCC 82901 Query 319549 ATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGC 319608 || |||| | ||||| |||| ||||||||||| ||||||||||||||||| | Sbjct 82900 TCCAGCCACTTGACGTTCTTCACATCCAGATGGTTGGTAGGCTCGTCAAGAAGCAGGATA 82841 Query 319609 TTTGCGTTCAGGAGCATTGCACGTGCA-AGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667 | | | || | ||||| ||| ||||| || ||||| ||||| || || ||||| Sbjct 82840 TCAGGAGCCTCGAAAACGGCACG-GCACAGAGCCAGCTTCATCTTCCAACCACCAGAAAG 82782 Query 319668 AG 319669 || Sbjct 82781 AG 82780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057807559762190