Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq17 98.7 1e-15 >seq17 Length=81907 Score = 98.7 bits (108), Expect = 1e-15 Identities = 209/306 (68%), Gaps = 6/306 (2%) Strand=Plus/Minus Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 || |||||||| ||| | | |||||| || ||||| ||||| || ||||| || Sbjct 59381 ACATAGAACTGCGCAAAC-ATGTGGCACGGTGGCAGCGCCATCTTCTTCAAATCCGCAGG 59323 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCA 145987 |||||| ||||| | | || | || | || | ||||| |||||| | || | Sbjct 59322 GTTCCAAGCGGTCATAATGATACGCC-GATCGTACGGGTTGGTCTTGAGTTTGTGGATGA 59264 Query 145988 GGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGG 146047 || ||||| || || || || ||| || |||||||||| ||||| ||| ||| Sbjct 59263 CTTCAGCCAGCTGATCAACACCTTGACCCGTATAGTCTGTCTTGGCATCCACATACTCGG 59204 Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCC 146107 ||||||| || | |||||| || ||||| || ||||| || || || || | || | Sbjct 59203 CCCCGAAATGGCGCCACTGAAAGCCGTATACAGGCCCTAGATCGCCAACTTCACGATGGC 59144 Query 146108 CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC-- 146165 | || || || | || || || || || |||||| | |||||||||||||| || Sbjct 59143 CTAGACCCGCGTTATCAAGAAACTCGCGCGAGCCGTTGCCATCCCAGATCTTGACACCAG 59084 Query 146166 CCTCGC 146171 |||||| Sbjct 59083 CCTCGC 59078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590067852960520