Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq101 107 1e-18 >seq101 Length=72697 Score = 107 bits (118), Expect = 1e-18 Identities = 277/417 (66%), Gaps = 14/417 (3%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| ||||| || ||| || | || || || | || || |||| ||||||||| Sbjct 41141 GCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGGCGCCTTCGCCTCCATCTTCTGGCTG 41082 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 || ||| |||||||| || || | || || |||||| | ||| ||||| || Sbjct 41081 CGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAACGAGCTTATTTCTCGTGATGAG 41022 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAG 22929 || || ||| ||||||||||| ||||||| ||| || ||| || | || Sbjct 41021 GGCCTGCACACCGACTTTGCTTGCCTGCTGTTCTCGCATCTGAACAACCGCCCCAGCAAG 40962 Query 22930 GACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAAGAG 22989 ||| || || | ||||| |||||||||| | || |||| || ||| | ||| Sbjct 40961 GACCTTGTGCAAAAGATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTCCTGACCGAG 40902 Query 22990 GCACTAAAGACACCC---CTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAG 23046 || || | | | || || || ||||| || |||| | |||||| || Sbjct 40901 GCTCT---GCCCTGCGGTCTGCTAGGAATGAACGCCGATCTGATGAAGCAGTACATTGAG 40845 Query 23047 TTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCC--- 23103 |||||||| || ||||| || | ||| || || | | ||| ||| || |||| Sbjct 40844 TTTGTTGCTGACCGCCTACTTGTTGCTCTAGGCAACGAGAAGGTGT---ACCGTGCCACA 40788 Query 23104 AATCCATTTGATTTCATGGATAACAT-TAGCATTGAAGGTAAAACAAACTTCTTTGA 23159 || ||||| || |||||||| ||||| | || | | || || || ||||||||||| Sbjct 40787 AACCCATTCGACTTCATGGAGAACATCTCGC-TCGGCGGCAAGACTAACTTCTTTGA 40732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356228333642839