Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq411 181 2e-40 seq101 140 5e-28 >seq411 Length=11963 Score = 181 bits (200), Expect = 2e-40 Identities = 1326/2111 (63%), Gaps = 49/2111 (2%) Strand=Plus/Minus Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765 |||| ||| | |||||||| || || || | || | | |||||||| |||||||| Sbjct 8402 TCCTGGTCTACAGTGAATTGGATAGGTGCAGCAGCAGCCTGCGTACGTAAGTAGTACATG 8343 Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825 ||||| || ||||| || |||| || || ||||| || || | ||| | Sbjct 8342 CCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGCATGCTGGTGATCTTGCCCATGGTG 8283 Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885 |||||| || || || || | ||| || ||| || ||||| || || | || ||| Sbjct 8282 GGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACCACGATCAGCA 8223 Query 78886 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 78945 ||||||| | | || || | ||| ||||||| || || || | |||||| Sbjct 8222 GCCATTTGCACAACTGTACGCTGGGAAATCTCCCAAACGGTCTTGTACAGAGCTTTAATA 8163 Query 78946 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002 || | |||| | | | | ||||| ||||| ||| || || ||||| | |||||| Sbjct 8162 TCAGCAGGAATGCTAGAGATGTTCTGGATGGAGCCATTGTCCGCAATAATGCGATTCTTC 8103 Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062 || | ||| |||||| ||| || | | || || || || || || Sbjct 8102 ATGTTGTCAGACCATAAACCAAGATCGACTAGGTCACGTAGAAGCCAGGGGTTGACGACC 8043 Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122 || || || |||| | || | || |||||| || || || ||||| | | Sbjct 8042 TGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTACGGTTCGAAGCAC 7983 Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182 ||||| || |||||||| || | || || || ||||| ||||| || | | | | Sbjct 7982 TCATTGTTGCCCAAAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAACTAGAAGAGAA 7923 Query 79183 TTTCTAAGACCGTA-TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGA 79241 || | | ||| | || | | || || || |||||||| ||| ||||| || ||| Sbjct 7922 TTGCGTACACCATGCTGCT-TAATCTTCTCCTTTAGAGAAGTCCAGTCCCACAGGTCACT 7864 Query 79242 CGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAG-CGTATGATCCTGTGT 79300 || |||| ||| | |||| | || | || || || || | || || | Sbjct 7863 AGGAGTCACATCCCACATATCAAACTGCAAGATGCC-TTGGGAGACAGGAGAACCCTCAT 7805 Query 79301 ATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAAT 79360 | ||| |||| || ||| | | ||| | ||| || || ||| ||| | Sbjct 7804 AAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGTGCGGCGTGGT 7745 Query 79361 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAAT 79420 | |||||||| ||||||| ||| ||||| | ||||||| || ||||| || | Sbjct 7744 AGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTTCAGGGGATTCAAAAGGC-ATG 7686 Query 79421 TTAAGAG-AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479 |||| || || ||||| || | || || ||||| | ||| || || | || | | Sbjct 7685 CGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAATGGGACGGTGGCGC 7626 Query 79480 TTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 79539 | || | | |||||| | | ||| || | ||| | ||| || || || || Sbjct 7625 ATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACATCGATGATGCGGTTTAGG 7566 Query 79540 TTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA-TCGTCCATCTAT 79598 || | || | |||| | || || | ||| || ||| ||| | || || | | Sbjct 7565 TTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCATACTCACCCTTGTTG 7506 Query 79599 TA-----CAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 79653 || | || | |||| |||||| || || || || || ||||||| || Sbjct 7505 TAGTCCACGAAGGAAGGAAGGGCGAGAGATGCTAGGTTGCACACAGCGACCTCATCAGGG 7446 Query 79654 TCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGT 79713 | || | || || |||||||| ||||| || |||||| |||| ||||| Sbjct 7445 GCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTGCGAATGGTACCTAGATTTTTC 7386 Query 79714 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATC 79773 ||||| ||||| ||| || || || || || || || || | ||||| ||| || Sbjct 7385 TGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTC 7326 Query 79774 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGACTTGT-ATCTCT 79831 |||| || | ||| || | ||| | | || | ||||| | | | || | | | Sbjct 7325 TGAGCCTCCAGAATGGCATACCACA-GTTTCTGGGCCTTGACAAC---CATGCGACCGCG 7270 Query 79832 TTTCTCTTTC--GTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAA 79889 ||| ||| ||| | | ||| | || ||||| || || | ||| | || Sbjct 7269 GCCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCAA 7210 Query 79890 TCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCAT 79949 || || ||||| | || ||||| | | ||| || ||| | || || || ||||| Sbjct 7209 GCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTCTTCTCAACACGCTTCAT 7150 Query 79950 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 80009 || | || ||||| || || | ||||| || | | | || || ||||| Sbjct 7149 GAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCCTTTCC 7090 Query 80010 TGTATTCTTTT-TAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 80068 ||||| |||| ||||||||| | | | ||||| |||||| || || | || | Sbjct 7089 GTGGTTCTTGCGTAAG-TCGAGGAACTCGAAGACATCAGCATGCCATGGCTCGAGATAAA 7031 Query 80069 TGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 80128 |||| | |||| ||||| |||||||| ||||| || | || | |||||||| || Sbjct 7030 TGGCAAAGGCTCCAGGTCGCTTGTTTCCACCCTGGTCAACATAACGGGCGGTGTTGTTGA 6971 Query 80129 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTC 80188 |||| | | ||| |||| || || || || ||||| || || || | || || | Sbjct 6970 AAACACGTAGCATGGGAACGATGCCGTTCGAAGTACCGTTAGTGCCAGCAATGTAAGAGC 6911 Query 80189 CACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 80246 || ||||||||||| | |||| ||||| || || || ||||| || || || | Sbjct 6910 CAGTGGCACGAATACGGTGAACATTG--AGACCGATACCACCAGCCATCTTGGAAATCAT 6853 Query 80247 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAG 80306 || || || | ||||| || |||||||| ||||| ||||| |||||| | ||| Sbjct 6852 GGCACAAGTCTTGAGGGTATCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCGACTAG 6793 Query 80307 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 80366 ||||| ||||| || | ||| || |||||||| | ||||| || ||||| Sbjct 6792 GAAACATGAAGACAACTGAGCCTGGGGAGTACCGGCATTAAAGAGCGTAGGTGATGCGTG 6733 Query 80367 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAA-TAGCTGAT--TCTAT---ATC 80420 || || | || ||||| || ||||| || |||| | ||| || | | | Sbjct 6732 AGTGAAGAACTTGCTAGACATAAGGTTGTAGGTTTCAAGCACACGATCGACTTTGTCACC 6673 Query 80421 CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 80480 ||| ||| || || || |||||||||| ||||||||| || | ||||| ||||| Sbjct 6672 CCA------AATACCCACAGCAACACGCATTATCATGTGCTGGGGACGCTCAACAATCTT 6619 Query 80481 GTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 80540 || | ||| | | ||| || || | || ||||| ||||| || | ||| Sbjct 6618 ACCATCAAGTTTGAGTAGGTACGAACGCTCGAGCGTCTTAAAGCCAAAGTACTGGTAGTT 6559 Query 80541 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC 80600 ||||| || ||||| | ||| | |||| || | |||||| | ||| | || Sbjct 6558 GAAGTCACGGTCGTACACAATGGCAGAGTCCAGCTCATCCTTGTGACGCATAA-TGCACT 6500 Query 80601 CATGGTGATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 80658 ||| || ||| || || || || || ||| | || || |||||||||| | Sbjct 6499 CAT-ATGTCTCTTTGGAGATCATAGGGGAGGCTTTACGGTTCGCGGGGTTAACATAGTGG 6441 Query 80659 AATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATAC 80717 | | || || ||| || | || | || || |||| |||||| ||||| || || Sbjct 6440 TAAAGGTCAGACACCAC-CGACGACCATTGCTTCTTGGTTTGCTTGTGAAGATTAGAGAC 6382 Query 80718 GGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTA 80776 || || | |||||| | ||||||||||| ||||| |||| | || || ||| || Sbjct 6381 AGCAATACGGGCGGCCAGGATGGCATAATCGGGATG-TGTGACGGTCATGTAGGCGGCAG 6323 Query 80777 TTTCGGCTGCC 80787 ||||||| ||| Sbjct 6322 TTTCGGCGGCC 6312 >seq101 Length=72697 Score = 140 bits (154), Expect = 5e-28 Identities = 375/570 (66%), Gaps = 14/570 (2%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || || || ||| |||||| ||||| || | | ||| || ||||| || Sbjct 40990 AACAGCAGGCAAGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAG 41049 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || || ||||| || |||||||| ||||| || ||||| || || | || Sbjct 41050 AAGGTCAGACCAGGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCT 41109 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 || || ||||| || || || || ||||||||||| || | || || | | | | Sbjct 41110 GAGAAAAAGATGCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTCGACTCC 41169 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 |||| |||||||| ||||||| |||||||| | || || || || || Sbjct 41170 TTGTCGGTGATCCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCA 41229 Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTA----TCTTTAACATAAGTATCGATCAA 50243 |||||||| || || || | | | || | | || || | || || || |||| Sbjct 41230 ATGGCATTGAACAGGTA----TGTGCGTTGCGAGGGCTCCTTGATGTAGGTGTCAATCAG 41285 Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303 || || |||| || || |||||||| || ||||| || |||||||| || | Sbjct 41286 CAGCGAGTAGGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCAGCG 41345 Query 50304 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCC 50363 ||||||| |||||||| || | || || ||| | | |||||| || || || || Sbjct 41346 GGCCTCGGGGATCTGCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCC 41405 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCG--TTGGGTGTT 50421 ||| ||| ||||| || || | | || || || | | ||| || | | Sbjct 41406 ATCAGAGGCAGCAAAGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAG 41465 Query 50422 A-GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 50480 | | || ||||| || | || ||| ||||| | ||| | || || | ||||| || || Sbjct 41466 ACGGTTGTTCCAGTCGTGGAGATCCTTAGAGAGATCAATCTCCTCAGCAGTCCAGAAGGA 41525 Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGAT 50510 ||||| ||||| || ||||| | |||||| Sbjct 41526 GGCCTCGGCCTTCTTGTACATCTGCCAGAT 41555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718257909249320