Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq153 87.8 2e-12
>seq153
Length=32091
Score = 87.8 bits (96), Expect = 2e-12
Identities = 120/162 (74%), Gaps = 8/162 (5%)
Strand=Plus/Minus
Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTT-ACCTCGAAATCG---TTGTGGCCGAAGTTGAA 5649
||||| || || ||||| ||| ||||| |||||||| ||| | ||| || |||||
Sbjct 15404 AGCTGAGCAATGCGGTCACCC-TCTTTGACCTCGAAGTCGGCATCATGGT-GA--TTGAA 15349
Query 5650 CAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGAT 5709
||| | || || | ||| ||||| ||||| || || || || || || |||||
Sbjct 15348 CAGGAGAACCTTGACTTCGCCACGGTAATCGGCATCAATGACACCAGCACCGGTATCGAT 15289
Query 5710 GAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCC 5751
||||||||| | |||||||||||||||||||| | ||||||
Sbjct 15288 GAAGTGCTTAGCAGCCAGGCCGGAGCGGGGAGCGATGCGGCC 15247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430048042317656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |