Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq153 87.8 2e-12 >seq153 Length=32091 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/162 (74%), Gaps = 8/162 (5%) Strand=Plus/Minus Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTT-ACCTCGAAATCG---TTGTGGCCGAAGTTGAA 5649 ||||| || || ||||| ||| ||||| |||||||| ||| | ||| || ||||| Sbjct 15404 AGCTGAGCAATGCGGTCACCC-TCTTTGACCTCGAAGTCGGCATCATGGT-GA--TTGAA 15349 Query 5650 CAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGAT 5709 ||| | || || | ||| ||||| ||||| || || || || || || ||||| Sbjct 15348 CAGGAGAACCTTGACTTCGCCACGGTAATCGGCATCAATGACACCAGCACCGGTATCGAT 15289 Query 5710 GAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCC 5751 ||||||||| | |||||||||||||||||||| | |||||| Sbjct 15288 GAAGTGCTTAGCAGCCAGGCCGGAGCGGGGAGCGATGCGGCC 15247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430048042317656