Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq411 410 3e-109
>seq411
Length=11963
Score = 410 bits (454), Expect = 3e-109
Identities = 1172/1782 (66%), Gaps = 26/1782 (1%)
Strand=Plus/Plus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGA 363449
|| || | ||||||| | ||| || |||||| ||| | | ||||| | ||||||||
Sbjct 6571 TTTGGCTTTAAGACGCTCGAGCGTTCGTACCTA-CTCAAACTTGATGGTAAGATTGTTGA 6629
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT---GTTGA 363506
|| || ||||| ||| |||||||||||||| | ||||| ||| || || ||
Sbjct 6630 GCGTCCCCAGCACATGATAATGCGTGTTGCTGTGGGTAT---TTGGGGTGACAAAGTCGA 6686
Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTATTCACGCACGCCACGCCAA 363565
| | | ||||||| || || ||| | | || || | ||||| ||||| | || |
Sbjct 6687 TCGTGTGCTTGAAACCTACAACCTTATGTCTAGCAAGT-TCTTCACTCACGCATCACCTA 6745
Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625
| | | ||||| || |||| | | ||| ||||||| || || || | | ||||
Sbjct 6746 CGCTCTTTAATGCCGGTACTCCCCAGGCTCAGTTGTCTTCATGTTTCCTAGTCGACATGA 6805
Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685
|||| || ||||||||| || | || || || |||| |||||| | ||||||||||
Sbjct 6806 AGGATGACAGCATCGAGGGCATTTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGA 6865
Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC 363744
|| || || || ||| | | ||| | ||||||| || | | |||||||
Sbjct 6866 TGGCTGGTGGTATCGGTCTCAATGTTCACCGTATTCGTGCCACTGG-CTCTTACATTGCT 6924
Query 363745 GGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
||||| || |||| |||| || | ||||||||||| ||||| || |||| || ||
Sbjct 6925 GGCACTAACGG-TACTTCGAACGGCATCGTTCCCATGCTACGTGTTTTCAACAACACCGC 6983
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| || || |||||||||||| ||||| || || ||||| || |||||||||||
Sbjct 6984 CCGTTATGTTGACCAGGGTGGAAACAAGCGACCTGGAGCCTTTGCCATTTATCTCGAGCC 7043
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
||||| ||| | || ||||| || || | || || ||| ||||| || ||| |
Sbjct 7044 ATGGCATGCTGATGTCTTCGAGTTCCTCGACTTACGCAAGAACCACGGAAAGGAAGAAGT 7103
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
||||| ||||| || |||| || || ||| | | ||| || |||||||| || ||
Sbjct 7104 CCGTGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGACTTGTTCATGAAGCGTGTTGA 7163
Query 363984 GGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043
| | || | ||| | ||| | ||||| | ||||| || || | | ||| |
Sbjct 7164 GAAGAATGAGGACTGGACTCTCATGTGCCCCAATGAATGCCCCGGCTTGGCGGATTGCTA 7223
Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGAC 364103
|| || || | || ||||| || |||||||| || |||||| | ||| | |
Sbjct 7224 TGGCGAAGAGTTTGAGGCTCTGTATGAAAAGTACGAGAAGGAGGGCCGCGGTCGCATGGT 7283
Query 364104 AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163
| || ||||| || |||| |||||| |||| | |||| |||||| || | ||
Sbjct 7284 TGTCAAGGCCCAGAAACTGTGGTATGCCATTCTGGAGGCTCAGACTGAGACTGGCAACCC 7343
Query 364164 CTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223
| |||| | |||||||| |||||||||||| ||| ||| | | || ||||| ||
Sbjct 7344 TTTTATGCTCTACAAAGACCACTGCAACCGCAAGAGCAATCAGAAAAATCTAGGTACCAT 7403
Query 364224 TCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282
|| |||| | ||||| || || |||||||| || ||| || || || ||| || |
Sbjct 7404 TC-GCAGTTCGAACCTGTGCACTGAGATTATCGAGTACTGTGCCCCTGATGAGGTCGCTG 7462
Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATGGTACTTTTG 364336
| || ||||| || || |||| ||||| | || || || | ||| | ||
Sbjct 7463 TGTGCAACCTAGCATCTCTCGCCCTTCCTTCCTTCGTGGACTACAACAAGGGTGAGTATG 7522
Query 364337 ACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCG 364396
|| | | || | || || ||| | || | | |||| || || | ||||
Sbjct 7523 ACTTTAAAAAGCTACACGAAGTCACCCAAGTTGTTGTTCGCAACCTAAACCGCATCATCG 7582
Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTG 364456
| |||| | || || | | ||||| | || ||||| || || || ||||
Sbjct 7583 ATGTGAATCACTACCCTGTCCAGGAAGCTCACAACAGCAACATGCGCCACCGTCCCATTG 7642
Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGC 364516
|| | |||||||||||||| ||||||| ||| | ||| ||| | ||||| || |
Sbjct 7643 GTGTCGGTGTACAGGGCCTGGCTGACGCTTTCCTTGCTCTCCGCATGCCTTTTGAATCCC 7702
Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576
|||| || || || || ||| |||| |||||||| || || |||||| | ||||
Sbjct 7703 CTGAAGCACGCCAGCTCAACAAGCAGATTTTTGAAACCATCTACCACGCCGCACTAACTG 7762
Query 364577 CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTT 364636
|||| || | || | || |||| | ||||| ||||||||||| || ||| | |
Sbjct 7763 CTTCAATGGAAATCGCCCAGACGGAGGGTACTTACTCAACTTATGAGGGTTCTCCTGTCT 7822
Query 364637 CGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGG 364696
| || || | || ||||||||| | ||| |||| || || || || ||| |||||
Sbjct 7823 CCCAAGGCATCTTGCAGTTTGATATGTGGGATGTGACTCCTAGTGACCTGTGGGACTGGA 7882
Query 364697 ATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCA 364756
| | ||| || ||||| |||||||| ||||| || || | || ||||
Sbjct 7883 CTTCTCTAAAGGAGAAGATTAAGCAGCATGGTGTACGCAATTCTCTTCTAGTTGCACCCA 7942
Query 364757 TGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAA 364816
|||| || || || | ||||| | || ||||| |||||||||||||||| |||
Sbjct 7943 TGCCTACAGCCAGCACGTCGCAGATTTTGGGCAACAATGAGTGCTTCGAACCGTACACAT 8002
Query 364817 GCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAG 364876
||| |||| ||||| |||||| | || || || | ||| || || | ||
Sbjct 8003 CCAACATTTACCAGCGCCGCGTTCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTTC 8062
Query 364877 TCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCG 364936
| || || ||| | || | ||| ||||| ||||||||| || || || |
Sbjct 8063 TACGTGACCTAGTCGATCTTGGTTTATGGTCTGACAACATGAAGAATCGCATTATTGCGG 8122
Query 364937 CTAATGGTTCTGTGCAGAACAT-TCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAA 364995
||||| || | |||||||| || || | |||| | ||| | || || | |||||
Sbjct 8123 ACAATGGCTCCATCCAGAACATCTCTAGCA-TTCCTGCTGATATTAAAGCTCTGTACAAG 8181
Query 364996 ACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTT 365055
||||| ||||| |||||| ||| || | | | ||||| || ||||| ||||||||
Sbjct 8182 ACCGTTTGGGAGATTTCCCAGCGTACAGTTGTGCAAATGGCTGCTGATCGTGGTGCTTTC 8241
Query 365056 ATCTGTCAGAGC-CAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTAC 365114
|| || | | | ||||| | ||| | ||||| | || ||| | |||| | ||
Sbjct 8242 AT-TGACCAATCGCAGTCTCTAAACATTCACATGAAAGATCCCACCATGGGCAAGATCAC 8300
Query 365115 ATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|||||| || || |||||| ||||| ||||| ||
Sbjct 8301 CAGCATGCACTTTGCTGGCTGGAAACTAGGTCTCAAGACGGG 8342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303333343848566
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |