Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq338 120 7e-22 seq145 84.2 5e-11 >seq338 Length=64627 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| || || || | || ||||| |||||| Sbjct 52049 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAG 52108 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| ||| ||||| || || || |||||||| || | ||| || || Sbjct 52109 ATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGATTTGACATTG 52168 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || |||||||| || || ||||| || |||| ||||||||| Sbjct 52169 TCAATGGTATCAGAGGACTCGACTTCGAGGGTAATGGTCTTGCCCGTCAAGGTCTTGACG 52228 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 52229 AAGATTTGCAT 52239 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || || || ||||| | || || || || || || | || ||||| || || Sbjct 52276 TTCTTTCTGAATGTTGTAGTCCGAAAGGGTACGGCCATCCTCGAGCTGCTTTCCAGCAAA 52335 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || |||||||| ||| ||||| || || ||||||||||| || | || || || Sbjct 52336 AATGAGACGCTGCTGATCCGGGGGGATACCCTCCTTATCCTGGATCTTGGACTTGACATT 52395 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| || || |||||||| || || ||||| || |||| |||||||| Sbjct 52396 GTCAATGGTATCAGAGGACTCGACTTCGAGGGTAATGGTCTTGCCCGTCAAGGTCTTGAC 52455 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 52456 GAAGATTTGCAT 52467 >seq145 Length=91869 Score = 84.2 bits (92), Expect = 5e-11 Identities = 134/191 (70%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || || || || ||||| | || ||||| || || || | || || || ||||||||| Sbjct 6022 TTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 6081 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||| || || ||| || || || || ||||| || || | || || || Sbjct 6082 AGGCGCTGCTG---GTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTG 6138 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| || |||||||| || || || ||||||||| Sbjct 6139 TCGATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACG 6198 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 6199 AAAATCTGCAT 6209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179636066327414