Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq411 149 6e-31 >seq411 Length=11963 Score = 149 bits (164), Expect = 6e-31 Identities = 482/739 (65%), Gaps = 16/739 (2%) Strand=Plus/Plus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956 || || || || || || || || || | | ||| ||||||| |||||||| | ||| Sbjct 6742 CCTACGCTCTTTAATGCCGGTACTCCCCAGGCTCAGTTGTCTTCATGTTTCCTAGTCGAC 6801 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| ||| |||| || |||| ||| | ||||||| ||||| | || || Sbjct 6802 -ATGAAGGATGACAGCATCGAGGGCATTTACGATACCCTCAAGACTTGTGCCATGATTTC 6860 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074 || || || || ||||| ||| ||| ||| |||| ||||||| || || ||| Sbjct 6861 CAAGATGGCTGGTGGTATCGGTCTCAATGTTCAC--CGTATTCGTGCCACTGGCTCTTAC 6918 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 || || || || || || || |||||| |||| || ||||| || || ||||||||| Sbjct 6919 ATTGCTGGCACTAACGGTACTTCGAACGGCATCGTTCCCATGCTACGTGTTTTCAACAAC 6978 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || || || || ||||||||||| | | | || | || || | |||||| Sbjct 6979 ACCGCCCGTTATGTTGACCAGGGTGGAAACAAGCGACCTGGAGCCTTTGCCATTTATCTC 7038 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| ||||| || || || | ||| ||||| | || ||||||||||| || || Sbjct 7039 GAGCCATGGCATGCTGATGTCTTCGAGTTCCTCGACTTACGCAAGAACCACGGAAAGGAA 7098 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | ||||| |||| || || ||| | ||| | || ||||| || Sbjct 7099 GAAGTCCGTGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGACTTGTTCATGAAGCGT 7158 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || ||||| || | ||||| ||| | || ||||||||||| ||||| || | || Sbjct 7159 GTTGAGAAGAATGAGGACTGGACTCTCATGTGCCCCAATGAATGCCCCGGCTTGGCGGA- 7217 Query 94375 GTTTGTGGATCGCG----TTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 ||| || ||| ||||| | |||||| ||||| | ||||| | Sbjct 7218 --TTG-CTATGGCGAAGAGTTTGAGGCTCTGTATGAAAAGTACGAGAAGGAGGGCCGCGG 7274 Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490 | | |||| | | || ||| |||||| || || |||| | ||| ||||| Sbjct 7275 TCGCATGGTTGTCAAGGCCCAGAAACTGTGGTATGCCATTCTGGAGGCTCAGACTGAGAC 7334 Query 94491 GGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 || | || | || | | ||| || | ||| |||| |||| ||| ||| | | | Sbjct 7335 TGGCAACCCTTTTATGCTCTACAAAGACCACTG-CAACCGCAAGAGCAATCAGAAAAATC 7393 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | || || || ||||| |||||||| |||||| ||||||| | | || || | Sbjct 7394 TAGGTACCATTCGCAGTTCGAACCTGTGCACTGAGATTATCGAGTACTGTGCCCCTGATG 7453 Query 94610 AGATTGCTGTGTGTAACCT 94628 || | |||||||| ||||| Sbjct 7454 AGGTCGCTGTGTGCAACCT 7472 Score = 122 bits (134), Expect = 9e-23 Identities = 198/280 (71%), Gaps = 4/280 (1%) Strand=Plus/Plus Query 95095 CTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCG 95154 || || || || |||||||| || ||| |||| ||||||| | |||||||| |||| Sbjct 7927 CTTCTAGTTGCACCCATGCCTACAGCCAGCACGTCGCAGATTTTGGGCAACAATGAGTGC 7986 Query 95155 TTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTC 95214 |||||||| | ||| |||||| | ||| | | || || || || || || |||| ||| Sbjct 7987 TTCGAACCGTACACATCCAACATTTACCAGCGCCGCGTTCTTGCTGGCGAGTTCCAGGTC 8046 Query 95215 ATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGGTCAA 95273 ||||| || ||||| ||||| | || ||| ||| | ||| |||||| | || Sbjct 8047 GTCAACCCCTGGCTTCTACGTGACCTAGTCGA-TCTTGGTTTATGGTCTGACAACATGAA 8105 Query 95274 GAACCA-ACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACA 95332 ||| | | | | || | ||| |||||| ||||||||||| | || || | || | Sbjct 8106 GAATCGCATTATTGCG-GACAATGGCTCCATCCAGAACATCTCTAGCATTCCTGCTGATA 8164 Query 95333 TCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 | || || || ||||||||||| |||||||| | ||||| Sbjct 8165 TTAAAGCTCTGTACAAGACCGTTTGGGAGATTTCCCAGCG 8204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494715698759480