Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq411 150 2e-31 seq101 134 2e-26 >seq411 Length=11963 Score = 150 bits (166), Expect = 2e-31 Identities = 844/1333 (63%), Gaps = 26/1333 (2%) Strand=Plus/Minus Query 115563 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 115622 ||||||||| ||||||||||| || | |||||| || | ||||| || | ||| Sbjct 8352 GTAGTACATGCCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGCATGCTGGTGATCTT 8293 Query 115623 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 115682 | | || ||| || |||| | ||| | | || ||||| || ||||| || Sbjct 8292 GCCCATGGTGGGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACC 8233 Query 115683 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTTCTGTA 115739 ||||| || ||||| | |||| | | || | || ||||| || || |||| Sbjct 8232 ACGATCAGCAGCCATTTG---CACAACTGTACGCTGGGAAATCTCCCAAACGGTCTTGTA 8176 Query 115740 GAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGAC 115799 || ||||||||| | || || ||| || ||||| |||||| || | Sbjct 8175 CAGAGCTTTAATATCAGCAGGAATGCTAGAGATGTTCTGGATGGAGCCATTGTCCGCAAT 8116 Query 115800 CATGAGATCCTTCATATCCTTTGACCAGAGACCAA--TCTTCTTGAGATCCTCCACG--A 115855 ||| ||| |||||| | | ||||| | ||||| || || | | | | | | Sbjct 8115 AATGCGATTCTTCATGTTGTCAGACCATAAACCAAGATCGACTAGGTCACGTAGAAGCCA 8056 Query 115856 GGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCG 115915 || | ||||| || ||||| || || || ||| | | | || ||||||| | Sbjct 8055 GGGG----TTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATG 8000 Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 115975 |||| || || |||||||||||||| ||||| || || | ||| |||||| ||||||| Sbjct 7999 TGTACGGTTCGAAGCACTCATTGTTGCCCAAAATCTGCGACGTGCTGGCTGTAGGCATGG 7940 Query 115976 GTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCC 116035 |||| | ||||| ||||| | ||| | | |||| ||||| || | || Sbjct 7939 GTGCAACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCC 7880 Query 116036 AGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGA 116093 |||| | | | | || | || | ||||||||||||||||| | ||| |||||||| Sbjct 7879 AGTCCCACAGGTCA-CTAGGAGTCACA-TCCCACATATCAAACTGCAAGATGCCTTGGGA 7822 Query 116094 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC 116153 | || || |||||| | || || | ||||| || || | ||| || Sbjct 7821 GACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGC 7762 Query 116154 CTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGT 116212 || || ||||| || || || |||||||| | || | || | || | || Sbjct 7761 AGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTG-CTTCAG 7703 Query 116213 CGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGC 116272 ||| ||||| | | ||| || || | || || || || || ||||||| | Sbjct 7702 GGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACAC 7643 Query 116273 CAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTAT 116332 |||| || || || | ||| || || |||| || || || || |||| || Sbjct 7642 CAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACAT 7583 Query 116333 CGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAAT 116392 |||| | | ||||| || ||||| | |||| ||| || ||||||| | | Sbjct 7582 CGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGT 7523 Query 116393 CAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACA 116452 || | | | | | | || | ||||||||||| || || || || |||| Sbjct 7522 CATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCGAGAGATGCTAGGTTGCACA 7463 Query 116453 CAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAA 116512 ||| | |||||| || |||||| ||||| || || |||| || ||||| || Sbjct 7462 CAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTGCGAA 7403 Query 116513 TGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATG 116572 |||| || | || || ||||| ||| ||| || || |||||||||||| | | Sbjct 7402 TGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAG 7343 Query 116573 GCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACAT-CGGCGGCTGGCACA 116631 | | || ||||| || || | || ||||| || | ||| | | | | | || | ||| Sbjct 7342 GGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTG-ACA 7284 Query 116632 GTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCC 116691 | | || ||||||| |||||||||| || || |||||||||||||| || Sbjct 7283 ACCATGCGACCGCGGCCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTCGCC- 7225 Query 116692 ACAGCC-TCTGAGAGCCCTGGTGCCTT-ATCTGGACAGAAGAGAGACCATTGACCACCCT 116749 | ||| || | | || || || || || || || | ||||| ||| | || || Sbjct 7224 ATAGCAATCCGCCAAGCCGGG-GCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTCT 7166 Query 116750 CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGC 116809 |||||| ||||||||||| | ||| |||||| || ||| |||| || || ||| | Sbjct 7165 TCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCAC 7106 Query 116810 GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 116869 | ||||||| | || || || || || || | || || | || ||| || |||| Sbjct 7105 GGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGAAGACATCAGCATGCC 7046 Query 116870 ACGGTTCCAGGTA 116882 | || || || || Sbjct 7045 ATGGCTCGAGATA 7033 >seq101 Length=72697 Score = 134 bits (148), Expect = 2e-26 Identities = 346/521 (66%), Gaps = 7/521 (1%) Strand=Plus/Plus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| || ||||| ||||| || || || || || |||||| |||||| Sbjct 41001 AGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACC 41060 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||||||||| ||||| || |||||| || | || | ||| ||||| ||||| Sbjct 41061 AGGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGAT 41120 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAA 127697 ||||| ||| || || |||| ||| |||| |||||| | || | |||| | Sbjct 41121 GCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG-TCGACTCCTTGTCGGTGA 41179 Query 127698 ACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAA 127757 |||||||| ||||| | ||||| ||| || || | || | || || | | Sbjct 41180 TCCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGA 41239 Query 127758 AGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 127817 | || | | || || || || |||||||| | || || || || || |||| Sbjct 41240 ACAGGTATGTGCGTTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTT 41299 Query 127818 CGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 127876 | ||||| ||| ||| || | ||| | ||||||| |||| || ||| ||| Sbjct 41300 CAGAGTGGATGTTTTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATC 41358 Query 127877 TGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 127936 || ||||| | | || | | || ||| || || || ||||| || ||||| Sbjct 41359 TGCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCA 41418 Query 127937 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 127993 || || || || || | ||||| | ||| || | | ||||| || | |||||| Sbjct 41419 AAGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAG 41478 Query 127994 TCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||| ||||||||| |||||||| | |||||| |||||||| Sbjct 41479 TCGTGGAGATCCTTAGAGAGATCAATCTCCTCAGCAGTCCA 41519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613497897697080