Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq411 150 2e-31
seq101 134 2e-26
>seq411
Length=11963
Score = 150 bits (166), Expect = 2e-31
Identities = 844/1333 (63%), Gaps = 26/1333 (2%)
Strand=Plus/Minus
Query 115563 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 115622
||||||||| ||||||||||| || | |||||| || | ||||| || | |||
Sbjct 8352 GTAGTACATGCCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGCATGCTGGTGATCTT 8293
Query 115623 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 115682
| | || ||| || |||| | ||| | | || ||||| || ||||| ||
Sbjct 8292 GCCCATGGTGGGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACC 8233
Query 115683 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTTCTGTA 115739
||||| || ||||| | |||| | | || | || ||||| || || ||||
Sbjct 8232 ACGATCAGCAGCCATTTG---CACAACTGTACGCTGGGAAATCTCCCAAACGGTCTTGTA 8176
Query 115740 GAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGAC 115799
|| ||||||||| | || || ||| || ||||| |||||| || |
Sbjct 8175 CAGAGCTTTAATATCAGCAGGAATGCTAGAGATGTTCTGGATGGAGCCATTGTCCGCAAT 8116
Query 115800 CATGAGATCCTTCATATCCTTTGACCAGAGACCAA--TCTTCTTGAGATCCTCCACG--A 115855
||| ||| |||||| | | ||||| | ||||| || || | | | | | |
Sbjct 8115 AATGCGATTCTTCATGTTGTCAGACCATAAACCAAGATCGACTAGGTCACGTAGAAGCCA 8056
Query 115856 GGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCG 115915
|| | ||||| || ||||| || || || ||| | | | || ||||||| |
Sbjct 8055 GGGG----TTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATG 8000
Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 115975
|||| || || |||||||||||||| ||||| || || | ||| |||||| |||||||
Sbjct 7999 TGTACGGTTCGAAGCACTCATTGTTGCCCAAAATCTGCGACGTGCTGGCTGTAGGCATGG 7940
Query 115976 GTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCC 116035
|||| | ||||| ||||| | ||| | | |||| ||||| || | ||
Sbjct 7939 GTGCAACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCC 7880
Query 116036 AGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGA 116093
|||| | | | | || | || | ||||||||||||||||| | ||| ||||||||
Sbjct 7879 AGTCCCACAGGTCA-CTAGGAGTCACA-TCCCACATATCAAACTGCAAGATGCCTTGGGA 7822
Query 116094 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC 116153
| || || |||||| | || || | ||||| || || | ||| ||
Sbjct 7821 GACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGC 7762
Query 116154 CTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGT 116212
|| || ||||| || || || |||||||| | || | || | || | ||
Sbjct 7761 AGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTG-CTTCAG 7703
Query 116213 CGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGC 116272
||| ||||| | | ||| || || | || || || || || ||||||| |
Sbjct 7702 GGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACAC 7643
Query 116273 CAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTAT 116332
|||| || || || | ||| || || |||| || || || || |||| ||
Sbjct 7642 CAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACAT 7583
Query 116333 CGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAAT 116392
|||| | | ||||| || ||||| | |||| ||| || ||||||| | |
Sbjct 7582 CGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGT 7523
Query 116393 CAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACA 116452
|| | | | | | | || | ||||||||||| || || || || ||||
Sbjct 7522 CATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCGAGAGATGCTAGGTTGCACA 7463
Query 116453 CAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAA 116512
||| | |||||| || |||||| ||||| || || |||| || ||||| ||
Sbjct 7462 CAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTGCGAA 7403
Query 116513 TGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATG 116572
|||| || | || || ||||| ||| ||| || || |||||||||||| | |
Sbjct 7402 TGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAG 7343
Query 116573 GCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACAT-CGGCGGCTGGCACA 116631
| | || ||||| || || | || ||||| || | ||| | | | | | || | |||
Sbjct 7342 GGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTG-ACA 7284
Query 116632 GTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCC 116691
| | || ||||||| |||||||||| || || |||||||||||||| ||
Sbjct 7283 ACCATGCGACCGCGGCCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTCGCC- 7225
Query 116692 ACAGCC-TCTGAGAGCCCTGGTGCCTT-ATCTGGACAGAAGAGAGACCATTGACCACCCT 116749
| ||| || | | || || || || || || || | ||||| ||| | || ||
Sbjct 7224 ATAGCAATCCGCCAAGCCGGG-GCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTCT 7166
Query 116750 CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGC 116809
|||||| ||||||||||| | ||| |||||| || ||| |||| || || ||| |
Sbjct 7165 TCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCAC 7106
Query 116810 GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 116869
| ||||||| | || || || || || || | || || | || ||| || ||||
Sbjct 7105 GGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGAAGACATCAGCATGCC 7046
Query 116870 ACGGTTCCAGGTA 116882
| || || || ||
Sbjct 7045 ATGGCTCGAGATA 7033
>seq101
Length=72697
Score = 134 bits (148), Expect = 2e-26
Identities = 346/521 (66%), Gaps = 7/521 (1%)
Strand=Plus/Plus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| || ||||| ||||| || || || || || |||||| ||||||
Sbjct 41001 AGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACC 41060
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
||||||||||| ||||| || |||||| || | || | ||| ||||| |||||
Sbjct 41061 AGGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGAT 41120
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAA 127697
||||| ||| || || |||| ||| |||| |||||| | || | |||| |
Sbjct 41121 GCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG-TCGACTCCTTGTCGGTGA 41179
Query 127698 ACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAA 127757
|||||||| ||||| | ||||| ||| || || | || | || || | |
Sbjct 41180 TCCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGA 41239
Query 127758 AGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 127817
| || | | || || || || |||||||| | || || || || || ||||
Sbjct 41240 ACAGGTATGTGCGTTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTT 41299
Query 127818 CGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 127876
| ||||| ||| ||| || | ||| | ||||||| |||| || ||| |||
Sbjct 41300 CAGAGTGGATGTTTTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATC 41358
Query 127877 TGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 127936
|| ||||| | | || | | || ||| || || || ||||| || |||||
Sbjct 41359 TGCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCA 41418
Query 127937 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 127993
|| || || || || | ||||| | ||| || | | ||||| || | ||||||
Sbjct 41419 AAGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAG 41478
Query 127994 TCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
|||| ||||||||| |||||||| | |||||| ||||||||
Sbjct 41479 TCGTGGAGATCCTTAGAGAGATCAATCTCCTCAGCAGTCCA 41519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613497897697080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |