Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq411 194 2e-44 seq101 105 8e-18 >seq411 Length=11963 Score = 194 bits (214), Expect = 2e-44 Identities = 834/1301 (64%), Gaps = 33/1301 (3%) Strand=Plus/Plus Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764 |||| |||||| |||| || ||||| || || ||||| || | || |||| Sbjct 6727 TTCACTCACGCATCACCTACGCTCTTTAATGCCGGTACTCCCCAGGCTCAGTTGTCTTCA 6786 Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824 |||||||| | | | ||||| || ||| | |||||||||| || |||| Sbjct 6787 TGTTTCCTAGTCGACATGAAGGATGACAGCATCGAGGGCATTTACGATACCCTCAAGACT 6846 Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884 |||||| || || ||| ||||||||||||||| | | | || | | | ||| Sbjct 6847 TGTGCCATGATTTCCAAGATGGCTGGTGGTATCGGTCTCAATGTTCACCGTATTCGTGCC 6906 Query 111885 AACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 111944 | ||| ||| || || || ||| || | || || |||| ||||| || Sbjct 6907 ACTGGCTCTTACATTGCTGGCACTAACGGTACTTCGAACGGCATCGTTCCCATGCTACGT 6966 Query 111945 GTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA----- 111999 || || ||| ||| || || ||||| |||| | ||| |||| || || Sbjct 6967 GTTTTCAACAACACCGCCCGTTATGTTGACCAGGGTGGAAA---CAAGCGACCTGGAGCC 7023 Query 112000 -TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTC 112058 | || | ||||| ||||||||||| || ||| || | |||||||| || || || Sbjct 7024 TTTGCCATTTATCTCGAGCCATGGCATGCTGATGTCTTCGAGTTCCTCGACTTACGCAAG 7083 Query 112059 AACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 112117 ||||| || | || || | || ||| || || || |||| || || ||||| || Sbjct 7084 AACCACGGAAAGGAAGAAGTCCG-TGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGA 7142 Query 112118 TCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGG 112176 | ||||||||| | |||||| ||| || | ||| ||||| | || || | || | Sbjct 7143 CTTGTTCATGAAGCGTGTTGAGAAGAATGAGGACTGGACTCTCATGTGCCCCAATGAATG 7202 Query 112177 CACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGG 112236 | ||||| | | ||| | || || |||||||| || || || |||||||||| Sbjct 7203 C-CCCGGCTTGGCGGATTGCTATGGCGAAGAGTTTGAGGCTCTGTATGAAAAGTACGAGA 7261 Query 112237 AAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCG--ATGTGTGGAAAGCTATTCTCAA 112294 | || | || | | | || | || || || | ||||| | || ||||| | Sbjct 7262 AGGAGGGCCGCG-GTC-GCATGGTTGTCAAGGCCCAGAAACTGTGGTATGCCATTCTGGA 7319 Query 112295 GTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAG 112354 | |||| || |||||||| | || | |||||| ||||||||| ||| |||| ||||| Sbjct 7320 GGCTCAGACTGAGACTGGCAACCCTTTTATGCTCTACAAAGACCACTGCAACCGCAAGAG 7379 Query 112355 TAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATT 112414 ||||| || ||| | ||| || ||||| ||||| || || || || | || | Sbjct 7380 CAATCAGAAAAATCTAGGTACCATTCGCAGTTCGAACCTGTGCACTGAGATTATCGAGTA 7439 Query 112415 TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 112474 | | |||||| |||||||| ||||| ||||| |||| || || | || Sbjct 7440 CTGTGCCCCTGATGAGGTCGCTGTGTGCAACCTAGCATCTCTCGCCCTTCCTTCCTTCGT 7499 Query 112475 GGATCCAGAGACAAAGACA--TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTC 112532 ||| | | | |||| | | ||| | | |||| || |||||||| || || ||| Sbjct 7500 GGA-CTACA-ACAAGGGTGAGTATGACTTTAAAAAGCTACACGAAGTCACCCAAGTTGTT 7557 Query 112533 ACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAA 112592 ||||||||| | | || ||| ||| ||||| || || |||| || Sbjct 7558 GTTCGCAACCTAAACCGCATCATCGATGTGAATCACTACCCTGTCCAGGAAGCTCACAAC 7617 Query 112593 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT 112652 || ||| | |||||||| |||||| ||||||| || || || || || | ||| || Sbjct 7618 AGCAACATGCGCCACCGTCCCATTGGTGTCGGTGTACAGGGCCTGGCTGACGCTTTCCTT 7677 Query 112653 CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAG 112712 | ||| | ||||| ||| ||||| | |||| || || ||||| Sbjct 7678 GCTCTCCGCATGCCTTTTGAATCCCCTGAAGCACGCCAGCTCAACAAGCAGATTTTTGAA 7737 Query 112713 ACAATGTATCACGCCGCTCTTGAGGCGAGTTC---GGAGTTGGCAGAGGTTGATGGTCCA 112769 || || || |||||||| || || ||| ||| | || || || ||| | Sbjct 7738 ACCATCTACCACGCCGCACTAACTGC---TTCAATGGAAATCGCCCAGACGGAGGGTACT 7794 Query 112770 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 112829 || ||| | |||||||||||| | || ||||| | | || ||||||||||||| | Sbjct 7795 TACTCAACTTATGAGGGTTCTCCTGTCTCCCAAGGCATCTTGCAGTTTGATATGTGGG-A 7853 Query 112830 GGTGAGACCAAGCTTCAC---TACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAG 112886 |||| || || | || | |||||| |||| ||||| || ||| || | Sbjct 7854 TGTGACTCCTAG--TGACCTGTGGGACTGGACTTCTCTAAAGGAGAAGATTAAGCAGCAT 7911 Query 112887 GGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTG 112946 ||| | || || |||| | | ||||| ||||| |||||| ||| | || || ||| Sbjct 7912 GGTGTACGCAATTCTCTTCTAGTTGCACCCATGCCTACAGCCAGCACGTCGCAGATTTTG 7971 Query 112947 GGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987 || || ||||| ||||| ||||| ||||| | ||||| || Sbjct 7972 GGCAACAATGAGTGCTTCGAACCGTACACATCCAACATTTA 8012 >seq101 Length=72697 Score = 105 bits (116), Expect = 8e-18 Identities = 346/525 (66%), Gaps = 17/525 (3%) Strand=Plus/Minus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 101873 ||||||||||| ||| | |||||||| |||||| | |||| ||||| | ||| || Sbjct 41519 TGGACTGCTGAGGAGATTGATCTCTCTAAGGATCTCCACGACTGGAACAACCGTCTGAAC 41460 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 || | || || | ||||| |||| || || |||||||||| || ||||| || Sbjct 41459 AAAGACGAGCAGTACTTCATCTCCCACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATC 41400 Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 101992 || || ||| || | | ||| | | |||||||| |||| | || || | | Sbjct 41399 GTCAACGAAAATCTCGTTGAGCGCTTCTCAGGCGAGGTGCAGATCCCC-GAGGCCCGCTG 41341 Query 101993 TTTCTATGCGTATCAATGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCA 102051 ||||| | || || | |||| ||| ||| | || || || ||| || | Sbjct 41340 CTTCTACG-GTTTCCAGATCATGATGGAAAACATCCACTCTGAAACCTACTCGCTGCTGA 41282 Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCT-TTGAA-GCCATCCAAAC 102109 | |||| || || ||||| | || || || || || || ||||| | || Sbjct 41281 TTGACACCTACATCAAGGA--GCCCTCGCAACGCACATACCTGTTCAATGCCATTGACAC 41224 Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTC 102166 |||| || || | || || || |||||| |||||||| | |||| |||| Sbjct 41223 TATTCCCTGCATCCGCCGCAAGGCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTC 41164 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 | | ||||| |||| || | || ||||| ||| ||||| ||||| ||||| || Sbjct 41163 GA---CGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGG 41107 Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 ||||| | | || | ||||| ||||| ||||||||||| ||||| |||||| Sbjct 41106 CGCCTTCGCCTCCATCTTCTGGCTGCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTC 41047 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||||||||| |||||||| ||||| || ||| || ||||| Sbjct 41046 AAACGAGCTTATTTCTCGTGATGAGGGCCTGCACACCGACTTTGC 41002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620732987993360