Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq411 172 6e-38 seq76 114 2e-20 seq101 100 3e-16 >seq411 Length=11963 Score = 172 bits (190), Expect = 6e-38 Identities = 1097/1742 (63%), Gaps = 66/1742 (4%) Strand=Plus/Minus Query 109364 CTGGCTCTAAACTAAATTGGATTGGTCGAGCTTTCGCCTTCGAGCGAAGATAATACATAC 109423 |||| |||| | | |||||||| ||| ||| |||| || || | || ||||| | Sbjct 8400 CTGG-TCTACAGTGAATTGGATAGGTGCAGCAGCAGCCTGCGTACGTAAGTAGTACATGC 8342 Query 109424 CCGTTTTGAGACCAGCCTTCCATGCGTACATA-TGCATTGAAGAGAGTTTGGAAAGTGTC 109482 |||| |||||||| ||||| || || | ||||| | || ||| | || Sbjct 8341 CCGTCTTGAGACCTAGTTTCCA-GCCAGCAAAGTGCATGCTGGTGATCTTGCCCATGGTG 8283 Query 109483 GGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCC 109542 ||| | ||| | ||| | ||||| || || || ||||| |||||||||||| Sbjct 8282 GGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACCACGATCAGCA 8223 Query 109543 GCCATGTCGATGA---TACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTG 109599 ||||| | | | ||| || || ||| ||||| || |||||||||| | || Sbjct 8222 GCCATTTGCACAACTGTACGCT---GGGAAATCTCCCAAACGGTCTTGTACAGAGCTTTA 8166 Query 109600 ATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCC 109659 |||||| | |||||| |||||| || || |||||| || | ||| ||| | Sbjct 8165 ATATCAGCAGGAATGCTAGAGATGTTCTGGATGGAGCCATTGTCCGCAATAATGCGATTC 8106 Query 109660 TTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTG---TTG 109716 ||||| | | ||||| | ||| | | || |||| ||| || | ||| Sbjct 8105 TTCATGTTGTCAGACCATAAACCAAGATCGACTAG---GTCACGTAGAAGCCAGGGGTTG 8049 Query 109717 ACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCG 109776 || || || || |||||||| ||| || |||| ||||| | ||||| |||||| Sbjct 8048 ACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTACGGTTCG 7989 Query 109777 AAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGA 109836 || |||||||||||||| | || || | ||| ||||| |||||||| || | ||| Sbjct 7988 AAGCACTCATTGTTGCCCAAAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAACTAGA 7929 Query 109837 AGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGA 109896 ||| || || | ||| | | ||| | | ||| | | ||| || | | Sbjct 7928 AGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAGTCCCACAGG 7869 Query 109897 CCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGA 109956 ||||| |||| || ||||||||||| || | | || | | ||||| Sbjct 7868 TCACTAGG---AGTCACA---TCCCACATATCAAACTGCAAGATGCCTTGGGAGACAGGA 7815 Query 109957 GAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGT 110016 ||||||| || | ||| | ||||| || ||| | || |||||| |||| Sbjct 7814 GAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGT 7755 Query 110017 GCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAG--- 110073 || || || || || || |||||||| || || | |||| | ||||| | Sbjct 7754 GCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTG---CTTCAGGGGAT 7698 Query 110074 TCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATG 110133 || || || | | | || || | || || || ||||| ||||||| ||||||| Sbjct 7697 TCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAATG 7638 Query 110134 GGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCT--ACGGGGTAAAAGTTGCGGTCGA 110191 || || || |||||| | |||| || || || ||||| || |||| Sbjct 7637 GGACGGTGGCGCATGTTGCTGTTGTGAGC--TTCCTGGACAGGGTAGTGATTCACATCGA 7580 Query 110192 TGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTT------GTCGT 110245 ||| || || || || ||| | |||| ||| || || || ||| | Sbjct 7579 TGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCAT 7520 Query 110246 AATCGAACGTTTTCGTC-TCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTG 110304 | || | | || | || ||| || | || || || | ||| || || ||| Sbjct 7519 ACTC-ACCCTTGTTGTAGTCC------ACGAAGGAAGGAAGGGCGAGAGATGCTAGGTTG 7467 Query 110305 CACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTC 110364 ||||||| ||| || | | ||| || | ||| || || |||| ||| ||||| Sbjct 7466 CACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTG 7407 Query 110365 TTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATG 110424 |||| ||| | || |||||||| ||| |||||| || || |||||||| Sbjct 7406 CGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATA 7347 Query 110425 TATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGG 110484 | ||| | ||||| || ||||| | || |||||||| | ||| | | ||| | Sbjct 7346 AAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTG 7287 Query 110485 ACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCT 110542 ||| |||| | || | || |||| ||||||||| |||| ||||||| || | Sbjct 7286 ACAACCATGCG--ACCGCGGCCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTT 7229 Query 110543 GTCCGTACACATCAGAAAGACCCTTCGCCTTG-TCGGGACAGAAGAGGGACCAATTTCCA 110601 || || ||| | | | || || || | ||| || | ||| | ||| | || Sbjct 7228 CGCCATAGCAATCCGCCA-AGCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCCTCA 7170 Query 110602 CCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGG 110661 || |||||| | ||||||||||| ||| ||||||| ||| |||| |||||||| Sbjct 7169 TTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGA 7110 Query 110662 CAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAG 110721 ||| | ||||| | || ||||| ||||| || | || || | || ||| | Sbjct 7109 GCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGAAGACATCAGCA 7050 Query 110722 TGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTA 110775 |||||||| |||||||| | || | || ||| | | || || |||||| | Sbjct 7049 TGCCATGGCTCGAGATAAATGGCAAAGGCTCC---AGGTCGCTTGTTTCCACCCTGGTCA 6993 Query 110776 ACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCA 110835 ||||| || || ||| ||||| || | ||||| |||| || || | || ||| Sbjct 6992 ACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCGAAGTACCG 6933 Query 110836 TTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCA 110895 || || || ||| || | |||||||||| ||| | || | ||| |||||| Sbjct 6932 TTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGACCGATACCA 6873 Query 110896 CCCGCCCACTTACTAATTTGTGCAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGA 110954 || ||| ||| ||| |||| | ||| |||| ||| | ||||| || || || Sbjct 6872 CCAGCCATCTTGGAAATCATGGCACAAGTCT-TGAGGGTATCGTAAATGCCCTCGATGCT 6814 Query 110955 ATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATT 111014 || |||| || | | ||| || || ||||||| ||||| | || || || ||||| Sbjct 6813 GTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGTACCGGCATT 6754 Query 111015 GAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCG 111072 ||||| ||||||| || ||| ||| ||| |||| ||||| |||||| || || Sbjct 6753 AAAGAGCGTAGGTGATGCGTGAGTGA--AGAACTTGCTAGACATAAGGTTGTAGGTTTCA 6696 Query 111073 AG 111074 || Sbjct 6695 AG 6694 >seq76 Length=97792 Score = 114 bits (126), Expect = 2e-20 Identities = 336/507 (66%), Gaps = 28/507 (6%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||||||||| || | | || || | ||| || | ||| | ||||| || || Sbjct 15612 CGATCGAAACGACCGGGTCTCATCAGCGCCTTATCCAGGACATCAGCGCGGTTGGTGCCG 15553 Query 11563 GCAATGACTACAAT--GCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620 || | ||| || || || | | ||| ||| || |||||||| || || | ||||| Sbjct 15552 GCCAGGACGACGATTTGCTCGGCGG--TGTTGAAGCCATCCATTTCAGTCAGGATCTGGT 15495 Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGC----CGAA-CGCTTCTT 11675 ||| ||| || |||||||||||| | | ||| ||| ||| ||||||| Sbjct 15494 TGAGCGTGGACTCGCGCTCATCGTTGCCA--CCTCCCA--TGCGGTTCGAGTCGCTTCTG 15439 Query 11676 A-----CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730 || | ||| |||||||| || || || | ||| || || ||| || ||| Sbjct 15438 GAGCGGCCAATAGCATCAATCTCGTCAATAAAAATGATGCATGGCGCGTTCTTGCGCGCC 15379 Query 11731 TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790 | ||||| ||||| |||||| || || || || || |||||||| || || | Sbjct 15378 GTAGCAAAAAGATCACGCACACGCGACGGACCCACGCCGACAAACATCTCGACAAACTCG 15319 Query 11791 GCG--GCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGA 11848 | | || || | ||||| ||| ||||| ||||| ||||| |||| || || | Sbjct 15318 GAGCCGCTGA-CGCTGAA-GAACGGAACGCCTGACTCGCCAGCCGTGGCCTTGGCTAGCA 15261 Query 11849 GAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-- 11906 | ||||| ||||| || || | || | || | ||||| || |||||||||||||| Sbjct 15260 GCGTCTTGCCCGTTCCCGGAGGGCCCGATAGGATAGCGCCGCGCGGGATCTTGGCACCCA 15201 Query 11907 -ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCT 11965 || |||| | || |||||||||||||| | ||||| |||| | || ||| Sbjct 15200 GACGCACAAACT---TTTCGGGCTTCTTGAGGAACTGCACAAACTCCATGATCTCGACCT 15144 Query 11966 TGGCGGAGTCGATACCCTCAACATCGG 11992 |||| ||| || || | ||||||| Sbjct 15143 TGGCCTCGTCCATTCCGGCCACATCGG 15117 >seq101 Length=72697 Score = 100 bits (110), Expect = 3e-16 Identities = 336/511 (66%), Gaps = 14/511 (3%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || ||||| ||||| || ||||| || |||| || ||||||||||| || Sbjct 41014 TGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACCAGGCATGAGACCA 41073 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | || ||||| ||||||| || || || || ||||||||||| ||| Sbjct 41074 CGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGATGCCCTCGACAGCA 41133 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACTTGAGAGC 119683 || || || | ||| |||| || ||| ||||| |||||| || |||||| ||||| Sbjct 41134 GCAAAGGCAACTAGGCGCTGGGC-AAACGTCGACTCCTTGTCGGTGATCCACTTCAGAGC 41192 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA-AAGTTGCTTCT 119742 ||||| |||||| || |||||||| | ||| | ||||| | ||| | || | | Sbjct 41193 CCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAACAGGTATGTGCG 41252 Query 119743 TTTC-AGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACC 119801 || | || | ||||| || || | ||||| || |||||||| ||| || | Sbjct 41253 TTGCGAGGGC--TCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTTCAGAGTGGATG 41310 Query 119802 ATTT-CATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTC 119860 ||| ||| || ||| | | || || |||| || |||| || ||||| ||| | Sbjct 41311 TTTTCCATCATG-ATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGCACCTCGCC 41369 Query 119861 AGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAA 119920 | || | || |||||| || || ||||| || |||| ||||| || | Sbjct 41370 TGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCAAAGAAGGCAAG 41429 Query 119921 GATGTACTTTATGAATTTCTGTTCATTATCGTT--GAGTGTT-TTCCAGTCGTCCATATC 119977 |||| ||||| | ||| || | | ||| || ||| |||||||||| | ||| Sbjct 41430 AATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAGTCGTGGAGATC 41489 Query 119978 TTTAGACAAGTCCACCTCTTCAGCTGTCCAG 120008 ||||| | || | ||| ||||| |||||| Sbjct 41490 CTTAGAGAGATCAATCTCCTCAGCAGTCCAG 41520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588967069651400