Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq411 172 6e-38
seq76 114 2e-20
seq101 100 3e-16
>seq411
Length=11963
Score = 172 bits (190), Expect = 6e-38
Identities = 1097/1742 (63%), Gaps = 66/1742 (4%)
Strand=Plus/Minus
Query 109364 CTGGCTCTAAACTAAATTGGATTGGTCGAGCTTTCGCCTTCGAGCGAAGATAATACATAC 109423
|||| |||| | | |||||||| ||| ||| |||| || || | || ||||| |
Sbjct 8400 CTGG-TCTACAGTGAATTGGATAGGTGCAGCAGCAGCCTGCGTACGTAAGTAGTACATGC 8342
Query 109424 CCGTTTTGAGACCAGCCTTCCATGCGTACATA-TGCATTGAAGAGAGTTTGGAAAGTGTC 109482
|||| |||||||| ||||| || || | ||||| | || ||| | ||
Sbjct 8341 CCGTCTTGAGACCTAGTTTCCA-GCCAGCAAAGTGCATGCTGGTGATCTTGCCCATGGTG 8283
Query 109483 GGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCC 109542
||| | ||| | ||| | ||||| || || || ||||| ||||||||||||
Sbjct 8282 GGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACCACGATCAGCA 8223
Query 109543 GCCATGTCGATGA---TACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTG 109599
||||| | | | ||| || || ||| ||||| || |||||||||| | ||
Sbjct 8222 GCCATTTGCACAACTGTACGCT---GGGAAATCTCCCAAACGGTCTTGTACAGAGCTTTA 8166
Query 109600 ATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCC 109659
|||||| | |||||| |||||| || || |||||| || | ||| ||| |
Sbjct 8165 ATATCAGCAGGAATGCTAGAGATGTTCTGGATGGAGCCATTGTCCGCAATAATGCGATTC 8106
Query 109660 TTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTG---TTG 109716
||||| | | ||||| | ||| | | || |||| ||| || | |||
Sbjct 8105 TTCATGTTGTCAGACCATAAACCAAGATCGACTAG---GTCACGTAGAAGCCAGGGGTTG 8049
Query 109717 ACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCG 109776
|| || || || |||||||| ||| || |||| ||||| | ||||| ||||||
Sbjct 8048 ACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTACGGTTCG 7989
Query 109777 AAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGA 109836
|| |||||||||||||| | || || | ||| ||||| |||||||| || | |||
Sbjct 7988 AAGCACTCATTGTTGCCCAAAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAACTAGA 7929
Query 109837 AGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGA 109896
||| || || | ||| | | ||| | | ||| | | ||| || | |
Sbjct 7928 AGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAGTCCCACAGG 7869
Query 109897 CCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGA 109956
||||| |||| || ||||||||||| || | | || | | |||||
Sbjct 7868 TCACTAGG---AGTCACA---TCCCACATATCAAACTGCAAGATGCCTTGGGAGACAGGA 7815
Query 109957 GAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGT 110016
||||||| || | ||| | ||||| || ||| | || |||||| ||||
Sbjct 7814 GAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGT 7755
Query 110017 GCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAG--- 110073
|| || || || || || |||||||| || || | |||| | ||||| |
Sbjct 7754 GCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTG---CTTCAGGGGAT 7698
Query 110074 TCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATG 110133
|| || || | | | || || | || || || ||||| ||||||| |||||||
Sbjct 7697 TCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAATG 7638
Query 110134 GGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCT--ACGGGGTAAAAGTTGCGGTCGA 110191
|| || || |||||| | |||| || || || ||||| || ||||
Sbjct 7637 GGACGGTGGCGCATGTTGCTGTTGTGAGC--TTCCTGGACAGGGTAGTGATTCACATCGA 7580
Query 110192 TGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTT------GTCGT 110245
||| || || || || ||| | |||| ||| || || || ||| |
Sbjct 7579 TGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCAT 7520
Query 110246 AATCGAACGTTTTCGTC-TCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTG 110304
| || | | || | || ||| || | || || || | ||| || || |||
Sbjct 7519 ACTC-ACCCTTGTTGTAGTCC------ACGAAGGAAGGAAGGGCGAGAGATGCTAGGTTG 7467
Query 110305 CACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTC 110364
||||||| ||| || | | ||| || | ||| || || |||| ||| |||||
Sbjct 7466 CACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTG 7407
Query 110365 TTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATG 110424
|||| ||| | || |||||||| ||| |||||| || || ||||||||
Sbjct 7406 CGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATA 7347
Query 110425 TATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGG 110484
| ||| | ||||| || ||||| | || |||||||| | ||| | | ||| |
Sbjct 7346 AAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTG 7287
Query 110485 ACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCT 110542
||| |||| | || | || |||| ||||||||| |||| ||||||| || |
Sbjct 7286 ACAACCATGCG--ACCGCGGCCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTT 7229
Query 110543 GTCCGTACACATCAGAAAGACCCTTCGCCTTG-TCGGGACAGAAGAGGGACCAATTTCCA 110601
|| || ||| | | | || || || | ||| || | ||| | ||| | ||
Sbjct 7228 CGCCATAGCAATCCGCCA-AGCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCCTCA 7170
Query 110602 CCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGG 110661
|| |||||| | ||||||||||| ||| ||||||| ||| |||| ||||||||
Sbjct 7169 TTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGA 7110
Query 110662 CAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAG 110721
||| | ||||| | || ||||| ||||| || | || || | || ||| |
Sbjct 7109 GCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGAAGACATCAGCA 7050
Query 110722 TGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTA 110775
|||||||| |||||||| | || | || ||| | | || || |||||| |
Sbjct 7049 TGCCATGGCTCGAGATAAATGGCAAAGGCTCC---AGGTCGCTTGTTTCCACCCTGGTCA 6993
Query 110776 ACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCA 110835
||||| || || ||| ||||| || | ||||| |||| || || | || |||
Sbjct 6992 ACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCGAAGTACCG 6933
Query 110836 TTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCA 110895
|| || || ||| || | |||||||||| ||| | || | ||| ||||||
Sbjct 6932 TTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGACCGATACCA 6873
Query 110896 CCCGCCCACTTACTAATTTGTGCAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGA 110954
|| ||| ||| ||| |||| | ||| |||| ||| | ||||| || || ||
Sbjct 6872 CCAGCCATCTTGGAAATCATGGCACAAGTCT-TGAGGGTATCGTAAATGCCCTCGATGCT 6814
Query 110955 ATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATT 111014
|| |||| || | | ||| || || ||||||| ||||| | || || || |||||
Sbjct 6813 GTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGTACCGGCATT 6754
Query 111015 GAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCG 111072
||||| ||||||| || ||| ||| ||| |||| ||||| |||||| || ||
Sbjct 6753 AAAGAGCGTAGGTGATGCGTGAGTGA--AGAACTTGCTAGACATAAGGTTGTAGGTTTCA 6696
Query 111073 AG 111074
||
Sbjct 6695 AG 6694
>seq76
Length=97792
Score = 114 bits (126), Expect = 2e-20
Identities = 336/507 (66%), Gaps = 28/507 (6%)
Strand=Plus/Minus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
|||||||||||||| || | | || || | ||| || | ||| | ||||| || ||
Sbjct 15612 CGATCGAAACGACCGGGTCTCATCAGCGCCTTATCCAGGACATCAGCGCGGTTGGTGCCG 15553
Query 11563 GCAATGACTACAAT--GCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620
|| | ||| || || || | | ||| ||| || |||||||| || || | |||||
Sbjct 15552 GCCAGGACGACGATTTGCTCGGCGG--TGTTGAAGCCATCCATTTCAGTCAGGATCTGGT 15495
Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGC----CGAA-CGCTTCTT 11675
||| ||| || |||||||||||| | | ||| ||| ||| |||||||
Sbjct 15494 TGAGCGTGGACTCGCGCTCATCGTTGCCA--CCTCCCA--TGCGGTTCGAGTCGCTTCTG 15439
Query 11676 A-----CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730
|| | ||| |||||||| || || || | ||| || || ||| || |||
Sbjct 15438 GAGCGGCCAATAGCATCAATCTCGTCAATAAAAATGATGCATGGCGCGTTCTTGCGCGCC 15379
Query 11731 TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790
| ||||| ||||| |||||| || || || || || |||||||| || || |
Sbjct 15378 GTAGCAAAAAGATCACGCACACGCGACGGACCCACGCCGACAAACATCTCGACAAACTCG 15319
Query 11791 GCG--GCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGA 11848
| | || || | ||||| ||| ||||| ||||| ||||| |||| || || |
Sbjct 15318 GAGCCGCTGA-CGCTGAA-GAACGGAACGCCTGACTCGCCAGCCGTGGCCTTGGCTAGCA 15261
Query 11849 GAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-- 11906
| ||||| ||||| || || | || | || | ||||| || ||||||||||||||
Sbjct 15260 GCGTCTTGCCCGTTCCCGGAGGGCCCGATAGGATAGCGCCGCGCGGGATCTTGGCACCCA 15201
Query 11907 -ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCT 11965
|| |||| | || |||||||||||||| | ||||| |||| | || |||
Sbjct 15200 GACGCACAAACT---TTTCGGGCTTCTTGAGGAACTGCACAAACTCCATGATCTCGACCT 15144
Query 11966 TGGCGGAGTCGATACCCTCAACATCGG 11992
|||| ||| || || | |||||||
Sbjct 15143 TGGCCTCGTCCATTCCGGCCACATCGG 15117
>seq101
Length=72697
Score = 100 bits (110), Expect = 3e-16
Identities = 336/511 (66%), Gaps = 14/511 (3%)
Strand=Plus/Plus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
|| || || ||||| ||||| || ||||| || |||| || ||||||||||| ||
Sbjct 41014 TGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACCAGGCATGAGACCA 41073
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
| || ||||| ||||||| || || || || ||||||||||| |||
Sbjct 41074 CGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGATGCCCTCGACAGCA 41133
Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACTTGAGAGC 119683
|| || || | ||| |||| || ||| ||||| |||||| || |||||| |||||
Sbjct 41134 GCAAAGGCAACTAGGCGCTGGGC-AAACGTCGACTCCTTGTCGGTGATCCACTTCAGAGC 41192
Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA-AAGTTGCTTCT 119742
||||| |||||| || |||||||| | ||| | ||||| | ||| | || | |
Sbjct 41193 CCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAACAGGTATGTGCG 41252
Query 119743 TTTC-AGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACC 119801
|| | || | ||||| || || | ||||| || |||||||| ||| || |
Sbjct 41253 TTGCGAGGGC--TCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTTCAGAGTGGATG 41310
Query 119802 ATTT-CATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTC 119860
||| ||| || ||| | | || || |||| || |||| || ||||| ||| |
Sbjct 41311 TTTTCCATCATG-ATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGCACCTCGCC 41369
Query 119861 AGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAA 119920
| || | || |||||| || || ||||| || |||| ||||| || |
Sbjct 41370 TGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCAAAGAAGGCAAG 41429
Query 119921 GATGTACTTTATGAATTTCTGTTCATTATCGTT--GAGTGTT-TTCCAGTCGTCCATATC 119977
|||| ||||| | ||| || | | ||| || ||| |||||||||| | |||
Sbjct 41430 AATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAGTCGTGGAGATC 41489
Query 119978 TTTAGACAAGTCCACCTCTTCAGCTGTCCAG 120008
||||| | || | ||| ||||| ||||||
Sbjct 41490 CTTAGAGAGATCAATCTCCTCAGCAGTCCAG 41520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588967069651400
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