Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq411 152 6e-32 seq101 111 2e-19 >seq411 Length=11963 Score = 152 bits (168), Expect = 6e-32 Identities = 818/1292 (63%), Gaps = 15/1292 (1%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | ||||| ||||| ||||| ||||| || ||||| || || | ||| | Sbjct 8012 TAAATGTTGGATGTGTACGGTTCGAAGCACTCATTGTTGCCCAAAATCTGCGACGTGCTG 7953 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 ||||| ||||| ||||| | | |||| || || | ||| | | ||| || ||| Sbjct 7952 GCTGTAGGCATGGGTGCAACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCC 7893 Query 106055 TTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112 || ||| | |||||| | | | | || || |||| | ||||||||||||| || | Sbjct 7892 TTTAGAGAAGTCCAGTCCCACAGGTCA-CTAGGAGTCACAT-CCCACATATCAAACTGCA 7835 Query 106113 GCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCA 106172 | |||||||| |||||||||||| | || || | ||| | | | || | Sbjct 7834 AGATGCCTTGGGAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGA 7775 Query 106173 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 106232 ||| || || | ||||| || ||||||||||| || | || | || Sbjct 7774 TTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCT 7715 Query 106233 CCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTT 106292 |||||| || ||||| | |||| || || | || || || || | Sbjct 7714 GGCGTGCTTCAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCT 7655 Query 106293 GAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGAT 106352 | ||||| | |||||| || | ||| ||||| || || | || || || || | Sbjct 7654 GTACACCGACACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGT 7595 Query 106353 AAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAA 106412 | ||| || |||| |||||||| || ||||| | |||| ||| || | Sbjct 7594 AGTGATTCACATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTA 7535 Query 106413 GTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATG 106472 | |||| | | ||| | | | | | | || | |||||||||| |||| Sbjct 7534 GCTTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCGAGAGATG 7475 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 | | ||||| ||||| |||||| | |||||| | ||| || || |||| || Sbjct 7474 CTAGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGT 7415 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 | ||||| ||| || || | ||| || || || ||||| |||||| || |||| Sbjct 7414 TCGAACTGCGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGT 7355 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCG 106651 ||||||| | || | || ||||| ||||| | || ||||| || | ||||| || Sbjct 7354 AGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCT 7295 Query 106652 GCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCA 106711 | | || | |||| | | || |||||| |||||||||| || || || ||| Sbjct 7294 GGGCCTTG-ACAACCATGCGACCGCGGCCCTCCTTCTCGTACTTTTCATACAGAGCCTCA 7236 Query 106712 AACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACC 106769 ||||| || ||| || || | | | | || || || | || || | |||| || Sbjct 7235 AACTCTTC-GCCATAGCAATCCGCCA-AGCCGGGGCATTCATTGGGGCACATGAGAGTCC 7178 Query 106770 ATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 106829 | | || || |||||| ||||||||||| | ||| |||||||||| | || | Sbjct 7177 AGTCCTCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATA 7118 Query 106830 GATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATG 106888 | || | | ||| || | ||||| | || ||||| ||||| || |||||||| | | Sbjct 7117 GGTCACGAGCACGGA-CTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGAAG 7059 Query 106889 ATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCT 106945 | ||| || ||||||||||| ||||| | || | | ||| ||| ||| | Sbjct 7058 ACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCC 6999 Query 106946 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 107005 || | ||||| || || ||| ||| || || || ||||| |||| || || | || Sbjct 6998 TGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCGAA 6939 Query 107006 TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCA 107065 ||| || || || ||| ||| | |||| | | | || | | | || Sbjct 6938 GTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGACCG 6879 Query 107066 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 107125 ||||| |||||| ||| || || ||||| | | || || | || || || | | Sbjct 6878 ATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCCCTCG 6819 Query 107126 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCA 107185 || ||| ||||| || ||| ||||| || |||| ||| | || ||||| Sbjct 6818 ATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGTACCG 6759 Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAA 107217 ||||| ||||| || |||| ||||||| |||| Sbjct 6758 GCATTAAAGAGCGTAGGTGATGCGTGAGTGAA 6727 >seq101 Length=72697 Score = 111 bits (122), Expect = 2e-19 Identities = 340/520 (65%), Gaps = 7/520 (1%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| || |||||||| || |||||||| || ||||||||| || || Sbjct 41002 GCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACCA 41061 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||||||||| ||||| || ||| | || | | ||| | || ||||| ||||| Sbjct 41062 GGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGATG 41121 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAA 117452 ||||| ||| ||||| |||| ||||||| ||| || | ||| | |||| | | Sbjct 41122 CCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG-TCGACTCCTTGTCGGTGAT 41180 Query 117453 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 117512 ||| |||| ||||| | ||||| || || || | ||| | ||||| | || Sbjct 41181 CCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAA 41240 Query 117513 TAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTC 117572 | | | || || ||||| ||||| ||||||||| || || ||||| Sbjct 41241 CAGGTATGTGCGTTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTTC 41300 Query 117573 GCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCT 117631 || | ||| ||| ||| | || | ||||||| |||| || ||| |||| Sbjct 41301 AGAGTGGATGTTTTCCATCATGATCTGGA-AACCGTAGAAGCAGCGGGCCTCGGGGATCT 41359 Query 117632 GCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 117691 |||| || | | || | | || ||| || || || ||||| || |||||| Sbjct 41360 GCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCAA 41419 Query 117692 AGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGT 117748 |||| || || |||| ||||| | || || | || |||| || | ||||||| Sbjct 41420 AGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAGT 41479 Query 117749 CGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 ||| ||||| || || | ||||| || || |||||||| Sbjct 41480 CGTGGAGATCCTTAGAGAGATCAATCTCCTCAGCAGTCCA 41519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589971854416120