Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq65 138 1e-27 >seq65 Length=140905 Score = 138 bits (152), Expect = 1e-27 Identities = 330/496 (67%), Gaps = 5/496 (1%) Strand=Plus/Plus Query 154627 TACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACC 154686 |||| |||||| | || | || || |||| ||| || || || ||||| || | Sbjct 48981 TACAGCCTAACTCTGGTGCCCAAGGCGAGTTTGCTGGTCTTCGTGCTATCCACCGCTATC 49040 Query 154687 ATCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAA 154746 || | | | |||| | ||| | || | |||||||| || | || || ||||||| Sbjct 49041 ATGAGGAAAATGGAGGCAAGAAACGTGATATCTGTTTGATTCCTGTCTCTGCCCATGGAA 49100 Query 154747 CTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGAT---G 154803 | || ||||| |||| ||||||||| ||| ||||| | ||||||||||| Sbjct 49101 CCAACCCTGCCTCAGCTGCCATGGCAGGTATGCGTGTTGTTCCTATCAAGTGTGATACCA 49160 Query 154804 ATGATGGTAACATAGACATCAAAGATCTAGAGAAGAA-AGCAATCATGAATACATTTGAA 154862 | ||| ||| | || ||| ||||| ||| || |||| | | || | |||| Sbjct 49161 CTACTGGAAACTTGGATATCGCTGATCTGGAGGCCAAGTGCAA-AAAGCATGCCGATGAA 49219 Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGA 154922 || || || ||||| || ||||| ||| |||| | |||||| || || | || Sbjct 49220 CTTGGCTGCATCATGATCACTTACCCTAGTACTTTTGGTATCTTTGAACCTGACGTCCGA 49279 Query 154923 CAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTA 154982 || ||| | | || |||| | ||||| ||||| || | || || || || | Sbjct 49280 AAGGCCTGTGATCTTGTGCATGCTTACGGTGGCCAGGTGTACATGGACGGCGCCAACATG 49339 Query 154983 AATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAAC 155042 ||||| ||| | || || | || ||||| ||| || ||||| || || | ||| Sbjct 49340 AATGCCCAGATTGGTCTTACCTCTCCTGGTGAGATTGGCGCTGATGTGTGCCACTTGAAC 49399 Query 155043 TTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGT 155102 ||||||| |||||||| ||||| ||||| ||||| || ||||| || |||||||| || Sbjct 49400 CTACATAAGACATTCTGCATTCCTCATGGCGGTGGTGGCCCTGGTGTCGGTCCTATCTGT 49459 Query 155103 GTAGCAAAACATCTCA 155118 || |||||||||| Sbjct 49460 GTCAAGAAACATCTCA 49475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579204017685920