Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq65 147 3e-30 >seq65 Length=140905 Score = 147 bits (162), Expect = 3e-30 Identities = 332/496 (67%), Gaps = 5/496 (1%) Strand=Plus/Plus Query 159302 TACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACC 159361 |||| |||||| | || | || || |||| ||| || || || ||||| || | Sbjct 48981 TACAGCCTAACTCTGGTGCCCAAGGCGAGTTTGCTGGTCTTCGTGCTATCCACCGCTATC 49040 Query 159362 ATCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAA 159421 || | | | |||| | ||| | || | |||||||| || | || || ||||||| Sbjct 49041 ATGAGGAAAATGGAGGCAAGAAACGTGATATCTGTTTGATTCCTGTCTCTGCCCATGGAA 49100 Query 159422 CTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGA-- 159479 | || ||||| ||||| | |||||||| ||| ||||| | ||||||||||| Sbjct 49101 CCAACCCTGCCTCAGCTGCCATGGCAGGTATGCGTGTTGTTCCTATCAAGTGTGATACCA 49160 Query 159480 -TGATGGCAACATAGACATCAAAGATCTAGAGAAGAAA-GCAATCATGAATACATTTGAA 159537 | ||| ||| | || ||| ||||| ||| || |||| | | || | |||| Sbjct 49161 CTACTGGAAACTTGGATATCGCTGATCTGGAGGCCAAGTGCAAAAA-GCATGCCGATGAA 49219 Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597 || || || ||||| || || || ||| |||| | |||||| | || || || Sbjct 49220 CTTGGCTGCATCATGATCACTTACCCTAGTACTTTTGGTATCTTTGAACCTGACGTCCGA 49279 Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657 || ||| | |||| |||| | ||||| ||||| || | || || || || | Sbjct 49280 AAGGCCTGTGATCTTGTGCATGCTTACGGTGGCCAGGTGTACATGGACGGCGCCAACATG 49339 Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717 ||||| ||| | ||||| | || |||| ||| || ||||| || || | ||| Sbjct 49340 AATGCCCAGATTGGTCTTACCTCTCCTGGTGAGATTGGCGCTGATGTGTGCCACTTGAAC 49399 Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGT 159777 |||||||||||||||| ||||| ||||| ||||| || ||||| || |||||||| || Sbjct 49400 CTACATAAGACATTCTGCATTCCTCATGGCGGTGGTGGCCCTGGTGTCGGTCCTATCTGT 49459 Query 159778 GTAGCAAAACATCTCA 159793 || |||||||||| Sbjct 49460 GTCAAGAAACATCTCA 49475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588042283673680