Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq338 96.9 3e-15
>seq338
Length=64627
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| || ||||| ||||||||||| || || ||||| || | | || | | |
Sbjct 52252 ACGCAGAACCAAGTGAAGAGTAGATTCTTTCTGAATGTTGTAGTCCGAAAGGGTACGGCC 52311
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| || | ||||| || ||||| || | |||||| ||||| || || || || || ||
Sbjct 52312 ATCCTCGAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGATCCGGGGGGATACCCTCCTT 52371
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||| || || || || ||| | || | || ||||| | || ||||| || || |
Sbjct 52372 ATCCTGGATCTTGGACTTGACATTGTCAATGGTATCAGAGGACTCGACTTCGAGGGTAAT 52431
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| ||||| || || || || || || || |||||
Sbjct 52432 GGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 52467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396272541643041
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |