Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq411 192 1e-43 seq101 185 2e-41 >seq411 Length=11963 Score = 192 bits (212), Expect = 1e-43 Identities = 821/1275 (64%), Gaps = 47/1275 (4%) Strand=Plus/Minus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| || || | || || | | |||||||| ||| || ||||| Sbjct 8054 GGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAC 7995 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 || |||| || ||| ||||| |||| |||||| | ||||||||||| |||||||| || Sbjct 7994 GGTTCGAAGCACTCATTGTTGCCCAAAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCA 7935 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC-GAAGCTCTGCCCAGTC 213085 || || ||| || | || || |||| || | | || || | |||||| Sbjct 7934 ACTAGAAGAGAATTGCGTACACCATGCT-GCTTAATCTTCTCCTTTAGAGAAGTCCAGTC 7876 Query 213086 CCATCTGCCAGACAGGTC-CTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 || ||||||| || | |||| | |||||| ||||||||||||||||||| Sbjct 7875 CC---------ACAGGTCACTAG-GAGTCACATCCCACATATCAAACTGCAAGATGCCTT 7826 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 | || || |||| |||| ||||| | || | | || ||| | || | Sbjct 7825 GGGAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTG 7766 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | || || || |||| ||||||||||||||| |||| | ||||||||| || | Sbjct 7765 AAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTT 7706 Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 | ||||| || ||||| | |||| | |||||||| ||||| || |||| Sbjct 7705 CAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGA 7646 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTG 213383 || ||||| | ||| | || ||| ||| |||| |||| | ||||| || Sbjct 7645 CACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGC-TTCCTGGACAGGGTAGTGATTC 7587 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 |||||||| ||| |||||||| | |||| |||||| | | ||| Sbjct 7586 ACATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTT----CGTGTA--GC 7533 Query 213444 TGATTGAACACGTAGCCCCC------GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCC 213497 | || || | || | || || | ||| || ||| ||||||| || Sbjct 7532 TTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCGAGAGATGCT 7473 Query 213498 AGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTG 213557 |||||||| || || ||||| | || | | |||||| || ||||| ||||||||||| Sbjct 7472 AGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTC 7413 Query 213558 CTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCTTGTA 213616 | || ||||| || || || | | | ||| ||||| | |||| || ||||| Sbjct 7412 GAACTGCGAATGGTACCTAGATTTTTCT-GATTGCTCTTGCGGTTGCAGTGGTCTTTGTA 7354 Query 213617 GAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTAC 213674 |||||| | ||| || ||||| ||| | | |||| | |||| ||| || | | Sbjct 7353 GAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAA--TGGCATACCACAGTTTC 7296 Query 213675 CTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCG 213734 ||||||||| ||| | ||| || | | | |||||||| ||| || || | Sbjct 7295 TGGGCCTTGACAACCATGC-GACCGCGGCCCTCCT--TCTCGTACTTTTCATACAGAGCC 7239 Query 213735 TTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCT 213793 | || || | ||| || | | | ||| || || || ||| |||||||| | Sbjct 7238 TCAAACTCTTCGCCATAGCAATCCG-CCAAGCCGGGGCATTCATTGGGGCACATGAGAGT 7180 Query 213794 CCAGTCC-CCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGA 213852 ||||||| | || |||| || | || |||||||| ||| || |||||| || || Sbjct 7179 CCAGTCCTCATTCTTCTC-AACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGA 7121 Query 213853 ACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAA 213912 | ||||| | | | || ||| ||| ||| ||||| | || || || || | Sbjct 7120 ATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGA 7061 Query 213913 AGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGC 213969 ||| || || ||||| ||||| | || ||||||||||| || || | |||| || | Sbjct 7060 AGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCAC 7001 Query 213970 CCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG 214029 ||||||| || | ||| ||||||| | || || | ||| || | ||||| | Sbjct 7000 CCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCG 6941 Query 214030 ACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTCATGGAGAG 214087 | ||||| || || || || || ||||| | ||| | | | || ||| |||| Sbjct 6940 AAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGA- 6882 Query 214088 CCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCC 214147 || || ||||| || |||||| |||||||| || | | | || || ||||| Sbjct 6881 -CCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCC 6823 Query 214148 GGCCATGCTGTCATC 214162 | ||||||||||| Sbjct 6822 CTCGATGCTGTCATC 6808 >seq101 Length=72697 Score = 185 bits (204), Expect = 2e-41 Identities = 486/733 (66%), Gaps = 23/733 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | |||||||||||||| ||||| || | | |||||||||||| Sbjct 40710 CTGGTAGTCGCCGACACGCTTCTCAAAGAAGTTAGTCTTGCCGCCGAGCGAGATGTTCTC 40769 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTA---TACACCCGTGTCAG-GCCCATCTGTTCCA 47954 ||||||| ||| ||||| |||| | |||||| | || ||| | | | Sbjct 40770 CATGAAGTCGAATGGGTT---TGTGGCACGGTACACCT-TCTCGTTGCCTAGAGCAACAA 40825 Query 47955 GCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014 | ||| | || || || |||| ||||| | ||| || | |||||| |||| | Sbjct 40826 GTAGGCGGTCAGCAACAAACTCAATGTACTGCTTCATCAGATCGGCGTTCATTCCTAGCA 40885 Query 48015 GGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074 | ||||| ||||| || || ||||||||||| ||| ||||| || | | Sbjct 40886 GACCGCAGGGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCAGTGATGA 40945 Query 48075 TCTGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131 ||| | || || || ||| || | ||||| ||| ||| | | |||| || Sbjct 40946 TCTTTTGCACAAGGTCCTTGCTGGGGCGGTTGTT---CAGATGCGAGA---ACAGCAGGC 40999 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | |||||||| |||||| ||| || || || || ||| |||| |||||| |||| Sbjct 41000 AAGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGAC 41059 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 ||||||||| || | || |||||||| || | ||||| | ||| ||||| |||| Sbjct 41060 CAGGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGA 41119 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 ||||||| || || || || || || | || | || | | | |||||| | || Sbjct 41120 TGCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTCGACTCCTTGTCGGTGA 41179 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGA 48371 |||| || |||||||| ||||| |||||| || || || || ||||| || Sbjct 41180 TCCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGA 41239 Query 48372 AGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACA 48428 | || | ||| | | ||| | ||||| | | |||||| | ||| Sbjct 41240 ACAGGTATGTGCGTTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGC---GAGTAGG 41296 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 | |||||||| | || || || ||||||||| ||||||||| | |||||| | Sbjct 41297 TTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGA 41356 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 |||||| || ||||| | ||| | ||||| || ||||| || ||||| || |||| Sbjct 41357 TCTGCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAG 41416 Query 48549 CAAAGAAGGCAAG 48561 ||||||||||||| Sbjct 41417 CAAAGAAGGCAAG 41429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931518675633920