Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq411 192 1e-43
seq101 185 2e-41
>seq411
Length=11963
Score = 192 bits (212), Expect = 1e-43
Identities = 821/1275 (64%), Gaps = 47/1275 (4%)
Strand=Plus/Minus
Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966
|||||||| | |||||| || || | || || | | |||||||| ||| || |||||
Sbjct 8054 GGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAC 7995
Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026
|| |||| || ||| ||||| |||| |||||| | ||||||||||| |||||||| ||
Sbjct 7994 GGTTCGAAGCACTCATTGTTGCCCAAAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCA 7935
Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC-GAAGCTCTGCCCAGTC 213085
|| || ||| || | || || |||| || | | || || | ||||||
Sbjct 7934 ACTAGAAGAGAATTGCGTACACCATGCT-GCTTAATCTTCTCCTTTAGAGAAGTCCAGTC 7876
Query 213086 CCATCTGCCAGACAGGTC-CTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144
|| ||||||| || | |||| | |||||| |||||||||||||||||||
Sbjct 7875 CC---------ACAGGTCACTAG-GAGTCACATCCCACATATCAAACTGCAAGATGCCTT 7826
Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204
| || || |||| |||| ||||| | || | | || ||| | || |
Sbjct 7825 GGGAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTG 7766
Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264
| || || || |||| ||||||||||||||| |||| | ||||||||| || |
Sbjct 7765 AAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTT 7706
Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324
| ||||| || ||||| | |||| | |||||||| ||||| || ||||
Sbjct 7705 CAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGA 7646
Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTG 213383
|| ||||| | ||| | || ||| ||| |||| |||| | ||||| ||
Sbjct 7645 CACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGC-TTCCTGGACAGGGTAGTGATTC 7587
Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443
|||||||| ||| |||||||| | |||| |||||| | | |||
Sbjct 7586 ACATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTT----CGTGTA--GC 7533
Query 213444 TGATTGAACACGTAGCCCCC------GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCC 213497
| || || | || | || || | ||| || ||| ||||||| ||
Sbjct 7532 TTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCGAGAGATGCT 7473
Query 213498 AGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTG 213557
|||||||| || || ||||| | || | | |||||| || ||||| |||||||||||
Sbjct 7472 AGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTC 7413
Query 213558 CTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCTTGTA 213616
| || ||||| || || || | | | ||| ||||| | |||| || |||||
Sbjct 7412 GAACTGCGAATGGTACCTAGATTTTTCT-GATTGCTCTTGCGGTTGCAGTGGTCTTTGTA 7354
Query 213617 GAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTAC 213674
|||||| | ||| || ||||| ||| | | |||| | |||| ||| || | |
Sbjct 7353 GAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAA--TGGCATACCACAGTTTC 7296
Query 213675 CTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCG 213734
||||||||| ||| | ||| || | | | |||||||| ||| || || |
Sbjct 7295 TGGGCCTTGACAACCATGC-GACCGCGGCCCTCCT--TCTCGTACTTTTCATACAGAGCC 7239
Query 213735 TTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCT 213793
| || || | ||| || | | | ||| || || || ||| |||||||| |
Sbjct 7238 TCAAACTCTTCGCCATAGCAATCCG-CCAAGCCGGGGCATTCATTGGGGCACATGAGAGT 7180
Query 213794 CCAGTCC-CCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGA 213852
||||||| | || |||| || | || |||||||| ||| || |||||| || ||
Sbjct 7179 CCAGTCCTCATTCTTCTC-AACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGA 7121
Query 213853 ACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAA 213912
| ||||| | | | || ||| ||| ||| ||||| | || || || || |
Sbjct 7120 ATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGA 7061
Query 213913 AGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGC 213969
||| || || ||||| ||||| | || ||||||||||| || || | |||| || |
Sbjct 7060 AGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCAC 7001
Query 213970 CCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG 214029
||||||| || | ||| ||||||| | || || | ||| || | ||||| |
Sbjct 7000 CCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCG 6941
Query 214030 ACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTCATGGAGAG 214087
| ||||| || || || || || ||||| | ||| | | | || ||| ||||
Sbjct 6940 AAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGA- 6882
Query 214088 CCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCC 214147
|| || ||||| || |||||| |||||||| || | | | || || |||||
Sbjct 6881 -CCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCC 6823
Query 214148 GGCCATGCTGTCATC 214162
| |||||||||||
Sbjct 6822 CTCGATGCTGTCATC 6808
>seq101
Length=72697
Score = 185 bits (204), Expect = 2e-41
Identities = 486/733 (66%), Gaps = 23/733 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | |||||||||||||| ||||| || | | ||||||||||||
Sbjct 40710 CTGGTAGTCGCCGACACGCTTCTCAAAGAAGTTAGTCTTGCCGCCGAGCGAGATGTTCTC 40769
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTA---TACACCCGTGTCAG-GCCCATCTGTTCCA 47954
||||||| ||| ||||| |||| | |||||| | || ||| | | |
Sbjct 40770 CATGAAGTCGAATGGGTT---TGTGGCACGGTACACCT-TCTCGTTGCCTAGAGCAACAA 40825
Query 47955 GCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014
| ||| | || || || |||| ||||| | ||| || | |||||| |||| |
Sbjct 40826 GTAGGCGGTCAGCAACAAACTCAATGTACTGCTTCATCAGATCGGCGTTCATTCCTAGCA 40885
Query 48015 GGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074
| ||||| ||||| || || ||||||||||| ||| ||||| || | |
Sbjct 40886 GACCGCAGGGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCAGTGATGA 40945
Query 48075 TCTGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131
||| | || || || ||| || | ||||| ||| ||| | | |||| ||
Sbjct 40946 TCTTTTGCACAAGGTCCTTGCTGGGGCGGTTGTT---CAGATGCGAGA---ACAGCAGGC 40999
Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191
| |||||||| |||||| ||| || || || || ||| |||| |||||| ||||
Sbjct 41000 AAGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGAC 41059
Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251
||||||||| || | || |||||||| || | ||||| | ||| ||||| ||||
Sbjct 41060 CAGGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGA 41119
Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311
||||||| || || || || || || | || | || | | | |||||| | ||
Sbjct 41120 TGCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTCGACTCCTTGTCGGTGA 41179
Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGA 48371
|||| || |||||||| ||||| |||||| || || || || ||||| ||
Sbjct 41180 TCCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGA 41239
Query 48372 AGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACA 48428
| || | ||| | | ||| | ||||| | | |||||| | |||
Sbjct 41240 ACAGGTATGTGCGTTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGC---GAGTAGG 41296
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
| |||||||| | || || || ||||||||| ||||||||| | |||||| |
Sbjct 41297 TTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGA 41356
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
|||||| || ||||| | ||| | ||||| || ||||| || ||||| || ||||
Sbjct 41357 TCTGCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAG 41416
Query 48549 CAAAGAAGGCAAG 48561
|||||||||||||
Sbjct 41417 CAAAGAAGGCAAG 41429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931518675633920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |