Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq101 223 6e-53 seq411 95.1 2e-14 >seq101 Length=72697 Score = 223 bits (246), Expect = 6e-53 Identities = 571/861 (66%), Gaps = 32/861 (4%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | ||| |||||| || || ||||||||||| Sbjct 41555 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCTGAGGAGATTGATCTC 41496 Query 25537 GCCAAGGACATGGACGGCTGGTACGC---TCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 | ||||| | ||| |||| || ||| ||||||||||||| | || || Sbjct 41495 TCTAAGGATCTCCACGACTGGAACAACCGTCTGAACAAAGACGAGCAGTACTTCATCTCC 41436 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || |||||||| ||||||||||| || || ||||| ||||| ||| | Sbjct 41435 CACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATCGTCAACGAAAATCTCGTTGAGCGC 41376 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 ||| | | || |||||| | |||||| || ||||||||||||||||| || Sbjct 41375 TTCTCAGGCGAGGTGCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGATG 41316 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA--CG 25768 ||||| | |||||||| || | ||| ||||| || ||||| | || | Sbjct 41315 GAAAACATCCACTCTGAAACCTACTC---GCTGCTGATTGACACCTACATCAAGGAGCCC 41259 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAG 25827 |||| | | || ||||| |||||| || ||| || ||| ||||| | ||| Sbjct 41258 TCGCAACGC-ACATAC-CTGTTCAATGCCATTGA-CACTATTCCCTGCATCCGCCGCAAG 41202 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTA 25887 || ||||| |||||||||||| | | || | ||||||| | |||| || || Sbjct 41201 GCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTCGACGTTTGCCCAGCGCCTAGTT 41142 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT- 25946 |||||||||||||| ||||||||||||||| || | || || ||||||||||||| Sbjct 41141 GCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGGCGCCTTCGCCTCCATCTTCTGGCTG 41082 Query 25947 --CAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 ||||| | || | |||||| || ||| ||| || |||||||| || | || Sbjct 41081 CGCAAGC----GTGGTCTCATGCCTGGTCTGACCTTCTCAAACGAGCTTATTTCTCGTGA 41026 Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC 26063 ||||| || |||| || ||||| |||||||| | | || || || | || || Sbjct 41025 TGAGGGCCTGCACACCGACTTTGCTTGCCTGCTGTTCTCG---CATCTGAACAAC-CGCC 40970 Query 26064 TTCTCAAGAGACC--GTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTT 26121 |||| |||| || | | ||||||| || || || | ||||||||||||||| Sbjct 40969 CCAGCAAG-GACCTTGTGCAAAAGATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTC 40911 Query 26122 CNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATAC 26181 | | || |||||| | || |||| || ||| Sbjct 40910 CTGACCGAGGCTCTGCCCTGCGGTCTGCTAGGAATGAACGCCGATCTGATGAAGCAGTAC 40851 Query 26182 ATTGAGTATGTGGCCGACCATCTGC-TGTGCCAGCTGGGACTCGCCAGACTCTACAGTAC 26240 ||||||| ||| || |||| || | ||| | || || || | | ||| || | Sbjct 40850 ATTGAGTTTGTTGCTGACCGCCTACTTGTTGC-TCTAGGCAACGAGAAGGTGTACCGTGC 40792 Query 26241 GCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGA 26300 | ||||| |||||||| ||||| ||||| ||| | | || ||||| ||||||||||| Sbjct 40791 CACAAACCCATTCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACTAACTTCTTTGA 40732 Query 26301 AAAGAGGGTCGGCGACTATCA 26321 ||| | ||||||||||| || Sbjct 40731 GAAGCGTGTCGGCGACTACCA 40711 >seq411 Length=11963 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | || || | | |||||| | ||| || ||| |||| Sbjct 8052 GTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTACGG 7993 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 ||||| || ||| |||||||||| ||||| | ||||||||| || ||||||||||| || Sbjct 7992 TTCGAAGCACTCATTGTTGCCCAAAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAAC 7933 Query 221236 CAGCAGACTGTTGCG 221250 || ||| ||||| Sbjct 7932 TAGAAGAGAATTGCG 7918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928830716390720