Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq338 102 5e-16
>seq338
Length=64627
Score = 102 bits (112), Expect = 5e-16
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||| || || | ||||| ||| |||||| || || || || | || ||
Sbjct 52246 ACGCAGACGCAGAACCAAGTGAAGAGTAGATTCTTTCTGAATGTTGTAGTCCGAAAGGGT 52305
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||| || || ||||||||||||||||| ||||| || ||||| || || || ||
Sbjct 52306 ACGGCCATCCTCGAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGATCCGGGGGGATACC 52365
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||| || || ||||| |||||| ||||| ||||||| | ||| ||
Sbjct 52366 CTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTATCAGAGGACTCGACTTCGAG 52425
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||||| || || || || | ||||| ||||| |||||
Sbjct 52426 GGTAATGGTCTTGCCCGTCAAGGTCTTGACGAAGATTTG 52464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268127168544524
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |