Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq65 129 7e-25
>seq65
Length=140905
Score = 129 bits (142), Expect = 7e-25
Identities = 328/496 (66%), Gaps = 5/496 (1%)
Strand=Plus/Minus
Query 138169 TGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATAC 138228
|||||||||| |||| |||||||| || ||||| || ||||| ||||| ||||| |
Sbjct 49475 TGAGATGTTTCTTGACACAGATAGGACCGACACCAGGGCCACCACCGCCATGAGGAATGC 49416
Query 138229 AGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTA 138288
||||||||||||||| || | || || ||||| || ||| |||| || | |
Sbjct 49415 AGAATGTCTTATGTAGGTTCAAGTGGCACACATCAGCGCCAATCTCACCAGGAGAGGTAA 49356
Query 138289 GACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAA 138348
|||| | ||| ||||| | || || || || | || ||||| ||||| | |||| |
Sbjct 49355 GACCAATCTGGGCATTCATGTTGGCGCCGTCCATGTACACCTGGCCACCGTAAGCATGCA 49296
Query 138349 CGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAA 138408
| | | ||| || || || || | |||||| | |||| ||| || || || |
Sbjct 49295 CAAGATCACAGGCCTTTCGGACGTCAGGTTCAAAGATACCAAAAGTACTAGGGTAAGTGA 49236
Query 138409 TCATAATACATGAGAGTTCAAATGTATTCATGATTGC-TTTCTTCTCTAGATCTTTGATG 138467
|||| || || |||||| | || | | |||| || ||| ||||| |||
Sbjct 49235 TCATGATGCAGCCAAGTTCATCGGCATGC-TTTTTGCACTTGGCCTCCAGATCAGCGATA 49177
Query 138468 TCTATGTTGCCATCA---TCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACT 138524
|| | ||| ||| | ||||||||||| | ||||| ||| ||||||||| |
Sbjct 49176 TCCAAGTTTCCAGTAGTGGTATCACACTTGATAGGAACAACACGCATACCTGCCATGGCA 49117
Query 138525 GCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCA 138584
|| ||||| || |||||||| || || | || |||| ||| | || | ||| |
Sbjct 49116 GCTGAGGCAGGGTTGGTTCCATGGGCAGAGACAGGAATCAAACAGATATCACGTTTCTTG 49057
Query 138585 TCTCCTGATCCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGAT 138644
|||| | | | |||||| ||||| || || || ||| |||| || || |
Sbjct 49056 CCTCCATTTTCCTCATGATAGCGGTGGATAGCACGAAGACCAGCAAACTCGCCTTGGGCA 48997
Query 138645 CCTGCGTTAGGTTGTA 138660
|| | |||||| ||||
Sbjct 48996 CCAGAGTTAGGCTGTA 48981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578989620936760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |