Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq411 138 1e-27
seq101 111 2e-19
seq76 84.2 3e-11
>seq411
Length=11963
Score = 138 bits (152), Expect = 1e-27
Identities = 1038/1651 (63%), Gaps = 55/1651 (3%)
Strand=Plus/Plus
Query 75305 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGT 75364
|||| ||||||| |||| || ||||| ||||| ||||| || | ||| ||||
Sbjct 6727 TTCACTCACGCATCACCTACGCTCTTTAATGCCGGTACTCCCCAGGCTCAGTTGTCTTCA 6786
Query 75365 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 75424
|| ||||| ||| || ||||| ||| ||| | || || || | || || | |
Sbjct 6787 TGTTTCCTAGTCGACATGAAGGATGACAGCATCGAGGGCATTTACGATACCCTCAAGACT 6846
Query 75425 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCC 75484
||||| || || ||| |||||| ||||| || | | | || | | | |||
Sbjct 6847 TGTGCCATGATTTCCAAGATGGCTGGTGGTATCGGTCTCAATGTTCACCGTATTCGTGCC 6906
Query 75485 AATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 75544
| | ||| ||| || || || ||| || | || || |||| ||||| ||
Sbjct 6907 ACTGGCTCTTACATTGCTGGCACTAACGGTACTTCGAACGGCATCGTTCCCATGCTACGT 6966
Query 75545 GTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAG------GGGTCC 75598
|| || ||| ||| || || ||||| | || ||| | |||| || ||
Sbjct 6967 GTTTTCAACAACACCGCCCGTTATGTTGACCA---GGGTGGAAACAAGCGACCTGGAGCC 7023
Query 75599 ATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTC 75658
| || | || | || ||||||||||| ||| || | |||||||| || |||||
Sbjct 7024 TTTGCCATTTATCTCGAGCCATGGCATGCTGATGTCTTCGAGTTCCTCGACTTACGCAAG 7083
Query 75659 AACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGA 75717
||||| || | ||||| | || ||| | | || || || | |||||||||| ||
Sbjct 7084 AACCACGGAAAGGAAGAAG-TCCGTGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGA 7142
Query 75718 CCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGG 75776
| | ||||||||||| |||||| || || | ||| |||| | || || | || |
Sbjct 7143 CTTGTTCATGAAGCGTGTTGAGAAGAATGAGGACTGGACTCTCATGTGCCCCAATGAATG 7202
Query 75777 CACCAGGTCTCTCCGAC-GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAA 75835
| || | | | | || || ||| || |||||||| || || || |||||| ||
Sbjct 7203 CCCCGGCT-TGGCGGATTGCTATGGC-GAAGAGTTTGAGGCTCTGTATGAAAAGTACGAG 7260
Query 75836 GAGGAGGGTAGAG--CCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTC 75892
||||||| | | | ||| ||| | || | | || | ||| | || |||||
Sbjct 7261 AAGGAGGGCCGCGGTCGCATGGT--TGT-CAAGGCCCAGAAACTGTGGTATGCCATTCTG 7317
Query 75893 AAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAG 75952
| | ||||| |||||||| | || | |||||| ||||| || || ||| |||
Sbjct 7318 GAGGCTCAGACTGAGACTGGCAACCCTTTTATGCTCTACAAAGACCACTGCAACCGCAAG 7377
Query 75953 AGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAG 76012
|| || || || ||| | || || || || || || || ||||| || ||| | |||
Sbjct 7378 AGCAATCAGAAAAATCTAGGTACCATTCGCAGTTCGAACCTGTGCACTGAGATTATCGAG 7437
Query 76013 TACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTAT 76072
||| | |||||| ||||| ||||| | ||||| |||||||||| |
Sbjct 7438 TACTGTGCCCCTGATGAGGTCGCTGTGTGCAACCTAGCATCTCTCGCCCTTCCTTCCTTC 7497
Query 76073 GTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTT 76132
|| | | | | | | ||| | | |||| || || ||| |||| | |||||
Sbjct 7498 GTGGACTACAACAAGGGTGAGTATGACTTTAAAAAGCTACACGAAGTCACCCAAGTTGTT 7557
Query 76133 ACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAG 76192
|| |||||||| |||| || ||| || || || || || | ||
Sbjct 7558 GTTCGCAACCTAAACCGCATCATCGATGTGAATCACTACCCTGTCCAGGAAGCTCACAAC 7617
Query 76193 TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT 76252
|| ||||| ||| | || |||||| | ||||| || || || || || | || ||
Sbjct 7618 AGCAACATGCGCCACCGTCCCATTGGTGTCGGTGTACAGGGCCTGGCTGACGCTTTCCTT 7677
Query 76253 TTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAA 76312
|||| | ||||| || |||||| || | || | || ||||||
Sbjct 7678 GCTCTCCGCATGCCTTTTGAATCCCCTGAAGCACGCCAGCTCAACAAGCAGATTTTTGAA 7737
Query 76313 ACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTAT 76372
||||| || ||||| | || || ||| | || | | | ||| | ||
Sbjct 7738 ACCATCTACCACGCCGCACTAACTGCTTCAATGGAAATCGCCCAGACGGAGGGTACTTAC 7797
Query 76373 GAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGT 76432
|| | |||||||||||| | |||||||| | | |||||||||||||||| | ||
Sbjct 7798 TCAACTTATGAGGGTTCTCCTGTCTCCCAAGGCATCTTGCAGTTTGATATGTGGG-ATGT 7856
Query 76433 GAAACCAAGCTCAAC--TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTC 76490
|| || || | | | | |||||| | ||| ||||| || ||| || | |||
Sbjct 7857 GACTCCTAG-TGACCTGTGGGACTGGACTTCTCTAAAGGAGAAGATTAAGCAGCATGGTG 7915
Query 76491 TTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 76550
| || || |||| | | ||||| ||||| |||||| ||| | || || ||||| |
Sbjct 7916 TACGCAATTCTCTTCTAGTTGCACCCATGCCTACAGCCAGCACGTCGCAGATTTTGGGCA 7975
Query 76551 ATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTG 76610
| ||||| ||||| ||||| |||||| | ||||| |||| | | | || || || |
Sbjct 7976 ACAATGAGTGCTTCGAACCGTACACATCCAACATTTACCAGCGCCGCGTTCTTGCTGGCG 8035
Query 76611 AGTTTGTCATTGTCAACAAGCACCT--CGTCAA--TGACCTCAAGAAGA--TTGGTCTCT 76664
|||| | ||||| | ||| | || | |||||| || || ||||| | |
Sbjct 8036 AGTTCCAGGTCGTCAA----CCCCTGGCTTCTACGTGACCT--AGTCGATCTTGGTTTAT 8089
Query 76665 GGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGG---GTGGTTCCATTCAAAATATCT 76721
|||| | | |||||| ||| || | | |||| ||| ||||| || || ||||
Sbjct 8090 GGTCTGACAACATGAAGAATCGCA---TTATTGCGGACAATGGCTCCATCCAGAACATCT 8146
Query 76722 CAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAAT---CAAGATGA 76778
| || || | |||||| || ||| ||| || || ||||| || | || |
Sbjct 8147 CTAGCATTCCTGCTGATATTAAAGCTCTGTACAAGACCGTTTGGGAGATTTCCCAGCGTA 8206
Query 76779 AAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGA 76838
|| || | | ||||| || ||||||||| |||||||| ||| || ||| |
Sbjct 8207 CAGTTG---TGCAAATGGCTGCTGATCGTGGTGCTTTCATTGACCAA--TCGCAGTCTCT 8261
Query 76839 ATCTATT--CATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCA-TATGTACGCGT 76895
| ||| |||| || ||| || ||| |||| || | ||||| | || || |
Sbjct 8262 AAACATTCACATGAAAGATCCCACCATGGGCAAGATCACCAGCATGCACTTTGCTGGC-T 8320
Query 76896 GGAAACAGGGGCTCAAAACCGGAATGTACTA 76926
|||||| || ||||| || || ||||||||
Sbjct 8321 GGAAACTAGGTCTCAAGACGGGCATGTACTA 8351
>seq101
Length=72697
Score = 111 bits (122), Expect = 2e-19
Identities = 340/520 (65%), Gaps = 7/520 (1%)
Strand=Plus/Minus
Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770
|||||||| || || ||||| | || || ||||| |||||||||| | || ||||
Sbjct 41519 TGGACTGCTGAGGAGATTGATCTCTCTAAGGATCTCCACGACTGGAACAACCGTCTGAAC 41460
Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830
|| | || || | ||||| |||| || || |||||||||| || ||||| ||
Sbjct 41459 AAAGACGAGCAGTACTTCATCTCCCACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATC 41400
Query 64831 GTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTCA 64890
|| || ||| || | | || | | || |||||||| ||| || ||||
Sbjct 41399 GTCAACGAAAATCTCGTTGAGCGCTTCTCAGGCGAGGTGCAGATCCCCGAGGCCCGCTGC 41340
Query 64891 TTCTACGCATATCAATGCCATAATG-AAATGGTTCATGGCGAAACATATTCAAAATTGAT 64949
||||||| | || | ||| ||| ||| | || ||||| || || ||||
Sbjct 41339 TTCTACGGTT-TCCAGATCATGATGGAAAACATCCACTCTGAAACCTACTCGCTGCTGAT 41281
Query 64950 TGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAACTGT 65009
||||| ||||| ||||| || || | | | || | ||||| | ||| |
Sbjct 41280 TGACACCTACATCAAGGAGCCCTCGCAACGCACATACCTGTTCAATGCCATTGACACTAT 41221
Query 65010 ACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCT 65068
|| || || ||||| | ||||| |||| ||| | | |||| | |||
Sbjct 41220 TCCCTGCATCCGCCGCAAGGCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTCGA- 41162
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
| || ||| ||||||| |||| ||||| ||| ||||| ||||| ||||| || | |
Sbjct 41161 CGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGGCGCCT 41102
Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188
|| | | || | ||| || ||||| ||||||||||| || || ||||||||| |
Sbjct 41101 TCGCCTCCATCTTCTGGCTGCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAACG 41042
Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
| |||||||| || |||||||| || ||| || |||||
Sbjct 41041 AGCTTATTTCTCGTGATGAGGGCCTGCACACCGACTTTGC 41002
>seq76
Length=97792
Score = 84.2 bits (92), Expect = 3e-11
Identities = 186/274 (68%), Gaps = 10/274 (4%)
Strand=Plus/Plus
Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGT---GGTGCCAAGATC 175287
||| ||||| | || |||||| | ||||| | | |||| || ||||||||||||
Sbjct 15158 GAGTTTGTGCAGTTCCTCAAGAAGCCCGAAA---AGTTTGTGCGTCTGGGTGCCAAGATC 15214
Query 175288 CCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCC 175347
|| || ||||| | || |||| || || ||||| ||||| || || ||| |||
Sbjct 15215 CCGCGCGGCGCTATCCTATCGGGCCCTCCGGGAACGGGCAAGACGCTGCTAGCCAAGGCC 15274
Query 175348 ATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAA--ACTTTGTGGAGA 175405
| || || || ||| || || ||| || || | || || || | ||||| ||||
Sbjct 15275 ACGGCTGGCGAGTCAGGCGTTCCGTTCTTC-AGCG-TCAGCGGCTCCGAGTTTGTCGAGA 15332
Query 175406 TGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATC 175465
||||||| || |||||| | | || || ||||| |||| | || ||| | ||
Sbjct 15333 TGTTTGTCGGCGTGGGTCCGTCGCGTGTGCGTGATCTTTTTGCTACGGCGCGCAAGAACG 15392
Query 175466 AACCATGTATTGTCTTCATTGATGAGATTGATGC 175499
||||| || | || ||||| |||||||||||
Sbjct 15393 CGCCATGCATCATTTTTATTGACGAGATTGATGC 15426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596560554513440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |