Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq66 89.7 2e-12 >seq66 Length=168719 Score = 89.7 bits (98), Expect = 2e-12 Identities = 119/162 (73%), Gaps = 5/162 (3%) Strand=Plus/Minus Query 309685 TCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCA 309744 || ||||| | ||| || |||||||| ||||| ||||| | ||||| |||| || ||| Sbjct 19752 TCAATCAAATGGGCAATGGTCATACGCGAAGGGATGGCGTGGGGGTTAATGATGATATCA 19693 Query 309745 GGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAACCAAT 309803 || | || || | || | || ||||||||||||| |||| ||| |||||| Sbjct 19692 GGCGTGATGCCCTCGC---GGGTAAATGGCATATCTTCTTGGCGGTATG-TCACACCAAT 19637 Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 || ||||||||| |||| | || ||||||||||| ||||| Sbjct 19636 TGTACCCTTTTGACCGTGACGAGACGCAAACTTGTCGCCAAT 19595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951944063267864