Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq411 190 2e-43 seq101 159 3e-34 seq338 113 4e-20 seq145 100 3e-16 seq64 98.7 1e-15 >seq411 Length=11963 Score = 190 bits (210), Expect = 2e-43 Identities = 1101/1742 (63%), Gaps = 51/1742 (3%) Strand=Plus/Minus Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGT---CGCTTTATCTTCATC 148118 ||||||||||| || ||||| ||||| ||||||| | | | |||| ||| Sbjct 8249 TGGTCAATGAAAGCACCACGATCAGCAGCCATTTGCACAACTGTACGCTGGGAA---ATC 8193 Query 148119 TCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACC 148178 ||||| | ||||||||||| || |||| | | ||||||| |||| ||| | Sbjct 8192 TCCCAAACGGTCTTGTACAGAGCTTTAATATCAGCAGGAATGCTAGAGATGTTCTGGATG 8133 Query 148179 GAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATC 148238 ||||| || ||||| ||| |||| ||| | ||| | ||| || |||| Sbjct 8132 GAGCCATTGTCCGCAATAATGCGATTCTTCATGTTGTCAGACCATAAACCAAGATCGACT 8073 Query 148239 AGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA 148298 |||||| | || | | || || ||||| |||||||| || || ||||| ||| | Sbjct 8072 AGGTCACGTAGAAGCCAGGGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGG 8013 Query 148299 TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTT 148358 || | |||| || ||||||| || |||| ||||||||||||||||||| || | Sbjct 8012 TAAATGTTGGATGTGTACGGTTCGAAGCACTCATTGTTGCCCAAAATCTGCGACGTGCTG 7953 Query 148359 GCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGC 148418 || || |||||| || || || || || ||||| | ||| | | || || || | Sbjct 7952 GCTGTAGGCATGGGTGCAACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCC 7893 Query 148419 TTCAGAGCCGCCCAGTCCCAGAGCGGCGAC--GGTGTCACGTTCCACATGTCGTACTGCA 148476 || |||| | ||||||||| | || || || ||||| | |||||| || |||||| Sbjct 7892 TTTAGAGAAGTCCAGTCCCACA--GGTCACTAGGAGTCACATCCCACATATCAAACTGCA 7835 Query 148477 GAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCA 148536 ||||| || | || ||||| || | ||| | || | || | || | Sbjct 7834 AGATGCCTTGGGAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGA 7775 Query 148537 GTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA 148596 ||| || || ||| ||| ||| || || || ||| ||| |||||||| Sbjct 7774 TTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCT 7715 Query 148597 GCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCT 148656 | || | ||| | ||||| || || | || ||||| || ||||||| Sbjct 7714 GGCGTGCTTCAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCT 7655 Query 148657 GTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGAT 148716 |||| || || |||||||| ||||| |||||| | | | || || || || | Sbjct 7654 GTACACCGACACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGT 7595 Query 148717 AGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCA 148776 |||| || |||||||| || || ||||| || || || | || | | | | | Sbjct 7594 AGTGATTCACATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTA 7535 Query 148777 GCAATTCAAAATCGTAC---------TTGTCATCTACGATGCATCGGTTCACGGCGATAG 148827 || || ||| || ||| |||| || |||| | | | | ||||| || Sbjct 7534 GCTTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGG---AAGGGCGAGAG 7478 Query 148828 AGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACA 148887 | ||||| |||||||| || |||||| ||||| | |||||| | ||||| | ||||| Sbjct 7477 ATGCTAGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACA 7418 Query 148888 GATT---GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGT 148944 | || |||| || | || | || || ||||||||||||| |||||| || Sbjct 7417 GGTTCGAACTGCGAATGGT---ACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGT 7361 Query 148945 CCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATG 149002 | ||||| ||||| | || |||||| || ||| | |||| ||| | | | Sbjct 7360 CTTTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCA-- 7303 Query 149003 CAGGTCCTGCGCGCGCACTTGC-TGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACA 149061 ||| | ||| || || | ||| ||| ||||||| |||||| ||||| Sbjct 7302 CAGTTTCTGGGCCTTGACAACCATGC-GACCGCGGCCCTCCTTCTCGTACTTTTCATACA 7244 Query 149062 GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGA 149121 | ||| ||| | ||||| |||||||| | | |||||||| | | |||||||||| Sbjct 7243 GAGCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCACATGA 7184 Query 149122 GCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGT 149181 | | ||| | | | | | || |||||||| |||| ||| | ||| || || Sbjct 7183 GAGTCCAGTCCTCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCA 7124 Query 149182 ACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGC 149241 | | ||||| || || | ||||| || ||| ||| | || ||| | Sbjct 7123 AGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACT 7064 Query 149242 TGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---C 149298 ||| | || || ||||| ||||| | || | || | || || |||||| | Sbjct 7063 CGAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTC 7004 Query 149299 CGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCAC 149358 | |||||||| || | || | ||||||| || || || | ||| || | ||||| Sbjct 7003 CACCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGT 6944 Query 149359 TGGCAGTGCCGTTAGT-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTG 149417 | | ||| |||||||| ||| |||| | ||| || || | ||| || ||| Sbjct 6943 TCGAAGTACCGTTAGTGCCAGC-AATGTAAGAGCCAGTGGCACGAATACGGTGAACATTG 6885 Query 149418 ACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAGTAGA 149475 | ||||| || || ||| | ||| || || || | |||| ||| || ||| | Sbjct 6884 AGACCGATACCACCAGCCAT-CTTGGAAATCATGGCACAAGTC-TTGAGGGTATCGTAAA 6827 Query 149476 TGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAAC 149535 |||||||||||||||| ||||||| | || || || || ||| || | Sbjct 6826 TGCCCTCGATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGG 6767 Query 149536 GCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTCATCATC 149594 | || ||||| || | || || ||||| || || | || || | ||| | Sbjct 6766 GAGTACCGGCATTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTAG-ACATAAGG 6708 Query 149595 TCGTACGACTCGAGCACGCGGTCCA---TGTCATCGCCATGGATGCCTATGGCGACGCGC 149651 | ||| | || ||||| || || | ||||| | ||| || || | || || ||| Sbjct 6707 TTGTAGGTTTCAAGCACACGATCGACTTTGTCA-CCCCA--AATACCCACAGCAACACGC 6651 Query 149652 ATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTT 149711 || | ||| ||||| || ||||| | | || ||| |||||| | ||| Sbjct 6650 ATTATCATGTGCTGGGGACGCTCAACAATCTTACCATCAAGTTTGAGTAGGTACGAACGC 6591 Query 149712 TCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCG 149771 || || ||||| |||||||||||| ||||| ||||| ||| ||| ||||||| | | Sbjct 6590 TCGAGCGTCTTAAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTACACAATGGCAGAG 6531 Query 149772 TC 149773 || Sbjct 6530 TC 6529 >seq101 Length=72697 Score = 159 bits (176), Expect = 3e-34 Identities = 356/525 (68%), Gaps = 21/525 (4%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| |||||||| || |||||||| ||||| || ||||| | | ||| ||||| | Sbjct 40710 CTGGTAGTCGCCGACACGCTTCTCAAAGAAGTTAGTCTTGCCGCCGAGCGAGATGTTCTC 40769 Query 120411 CATAAACTCGAACGGGTTGCTCGC--GTTAAAGTATTTCGGCTGGCCCAACTGTACGAGC 120468 ||| || ||||| ||||| | || | || | | ||| | ||| | || || Sbjct 40770 CATGAAGTCGAATGGGTTTGTGGCACGGTACACCTTCTCG--TTGCCTAGAGCAACAAGT 40827 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCA-A 120527 || ||||| || |||||||||||||||| ||| | |||||||| || |||| | Sbjct 40828 AGGCGGTCAGCAACAAACTCAATGTACTGCTTCATCAGATCGGCGTTCATTCCTAGCAGA 40887 Query 120528 CGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACAT 120587 | || |||| ||| || | ||||||||||| || | || || || ||| || Sbjct 40888 CCGCAG-GGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCAGTGATGAT 40946 Query 120588 GGCGAGCATAGTGTG---GCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCA 120644 ||| | || || ||| |||| | |||||| | | | |||||| Sbjct 40947 CTTTTGCACAAGGTCCTTGCTGGGGCGGTTGT-TCAGATGCGAGAACAG-----CAGGCA 41000 Query 120645 CGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCC 120704 |||||||| |||||||||||||| || || || || |||||||| || ||||| || Sbjct 41001 AGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACC 41060 Query 120705 GGGCATGATGCCTTTCGTCTTG---ATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761 ||||||| || || |||| | |||| |||| ||| ||| ||| || || || Sbjct 41061 AGGCATGAGACCA--CG-CTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAA 41117 Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC 120821 | |||||| || |||||||| || | ||||| ||| ||||||| | |||| | Sbjct 41118 GATGCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTCGACTCCTTGTCGGT 41177 Query 120822 GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866 ||||||||||| ||||| |||||||| ||| | ||| || || Sbjct 41178 GATCCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAAT 41222 >seq338 Length=64627 Score = 113 bits (124), Expect = 4e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| || ||||| ||| | ||| | | | ||||| |||||||| || Sbjct 52499 GTAGATTCTTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCA-TCCTCAAGCTGCTTTCC 52557 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| |||||||| || |||||||| |||||| ||| Sbjct 52558 GGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTT 52617 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||||| || ||| || |||| ||| | ||| || ||||| || || Sbjct 52618 GACGTTGTCAATGGTGTCGGAGGACTCGACTTCGAGGGTAATGGTCTTTCCGGTAAGGGT 52677 Query 133643 TTTTAC 133648 || || Sbjct 52678 CTTGAC 52683 Score = 107 bits (118), Expect = 2e-18 Identities = 131/176 (74%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || ||| | | | ||||| |||||||| || Sbjct 52783 GTAGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCAAGCTGCTTTCC 52841 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| |||||||| || |||||||| |||||| ||| Sbjct 52842 AGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTAGACTT 52901 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 | | |||| || || | | |||||| |||| ||||| ||| ||||| |||| Sbjct 52902 AACGTTGTCAATAGTATCCGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTCA 52957 Score = 102 bits (112), Expect = 8e-17 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 || || |||||||| || ||||| || | | | | ||| |||||||||||||| | Sbjct 52271 GTAGATTCTTTCTGAATGTTGTAGTC--CGAAAGGGTACGGCCATCCTCGAGCTGCTTTC 52328 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || ||||||| |||||||| || || ||||| || ||||| || |||||| || Sbjct 52329 CAGCAAAAATGAGACGCTGCTGATCCGGGGGGATACCCTCCTTATCCTGGATCTTGGACT 52388 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| || || | || ||| || |||| ||| | ||| ||||| |||| | Sbjct 52389 TGACATTGTCAATGGTATCAGAGGACTCGACTTCGAGGGTAATGGTCTTGCCCGTCAAGG 52448 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 52449 TCTTGACGAAGATTTGCAT 52467 >seq145 Length=91869 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || ||||||||||| || || ||||| |||||| Sbjct 6055 TCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 6114 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | || | ||||| | || ||| || |||| ||| | Sbjct 6115 TCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTAATC 6174 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || || || |||||||||||||| Sbjct 6175 GTCTTACCCGTAAGGGTCTTGACGAAAATCTGCAT 6209 >seq64 Length=146407 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| || ||| | | | ||||| |||||||| | Sbjct 70935 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCA-TCCTCAAGCTGCTTAC 70877 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | ||||||||||| || || ||||| |||||||| |||||| || Sbjct 70876 CAGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACT 70817 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | |||||| | | ||| || || | ||| | ||| || || ||||| | Sbjct 70816 TGACGTTGTCGATCGTGTCCGAAGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGG 70757 Query 133642 TTTTTACGAAA 133652 | || |||||| Sbjct 70756 TCTTGACGAAA 70746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483413470132120