Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq101 120 4e-22 >seq101 Length=72697 Score = 120 bits (132), Expect = 4e-22 Identities = 342/520 (66%), Gaps = 7/520 (1%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| || ||||| ||||| || || || || || |||||| |||||| Sbjct 41002 GCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACCA 41061 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||||||||| ||||| || |||||| || | || | ||| ||||| ||||| Sbjct 41062 GGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGATG 41121 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAA 130194 ||||| ||| || || |||| || |||| ||||| | || | |||| | Sbjct 41122 CCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG-TCGACTCCTTGTCGGTGAT 41180 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 130254 |||||||| ||||| | ||||| ||| || || | || | || || | || Sbjct 41181 CCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAA 41240 Query 130255 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 130314 || | | || || || || |||||||| | || || || || || ||||| Sbjct 41241 CAGGTATGTGCGTTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTTC 41300 Query 130315 GCCATGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 130373 |||| ||| ||| || | ||| | ||||||| |||| || ||| |||| Sbjct 41301 AGAGTGGATGTTTTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCT 41359 Query 130374 GTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 130433 | ||||| ||| || | | || ||| || || || ||||| || |||||| Sbjct 41360 GCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCAA 41419 Query 130434 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 130490 | || || || || | ||||| | ||| || | | ||||| || | ||||||| Sbjct 41420 AGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAGT 41479 Query 130491 CGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||| |||||||| |||||||| | |||||| |||||||| Sbjct 41480 CGTGGAGATCCTTAGAGAGATCAATCTCCTCAGCAGTCCA 41519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618425822976280