Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq101 105 8e-18 >seq101 Length=72697 Score = 105 bits (116), Expect = 8e-18 Identities = 346/525 (66%), Gaps = 17/525 (3%) Strand=Plus/Minus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 94497 ||||||||||| ||| | |||||||| |||||| | |||| ||||| | ||| || Sbjct 41519 TGGACTGCTGAGGAGATTGATCTCTCTAAGGATCTCCACGACTGGAACAACCGTCTGAAC 41460 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 || | || || | ||||| |||| || || |||||||||| || ||||| || Sbjct 41459 AAAGACGAGCAGTACTTCATCTCCCACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATC 41400 Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616 || || ||| || | | ||| | | |||||||| |||| | || || | | Sbjct 41399 GTCAACGAAAATCTCGTTGAGCGCTTCTCAGGCGAGGTGCAGATCCCC-GAGGCCCGCTG 41341 Query 94617 CTTCTATGCGTATCAGTGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCA 94675 |||||| | | ||| |||| ||| ||| | || || || ||| || | Sbjct 41340 CTTCTACGGTTTCCAGA-TCATGATGGAAAACATCCACTCTGAAACCTACTCGCTGCTGA 41282 Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCT-TTGAA-GCCATCCAAAC 94733 | |||| || || ||||| | || || || || || || ||||| | || Sbjct 41281 TTGACACCTACATCAAGGA--GCCCTCGCAACGCACATACCTGTTCAATGCCATTGACAC 41224 Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTC 94790 |||| || || | || || || |||||| |||||||| | |||| |||| Sbjct 41223 TATTCCCTGCATCCGCCGCAAGGCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTC 41164 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 | | ||||| |||| || | || ||||| ||| ||||| ||||| ||||| || Sbjct 41163 GA---CGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGG 41107 Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 ||||| | | || | ||||| ||||| ||||||||||| ||||| |||||| Sbjct 41106 CGCCTTCGCCTCCATCTTCTGGCTGCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTC 41047 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||||||| |||||||| ||||| || ||| || ||||| Sbjct 41046 AAACGAGCTTATTTCTCGTGATGAGGGCCTGCACACCGACTTTGC 41002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583251956308120