Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq101 105 8e-18
>seq101
Length=72697
Score = 105 bits (116), Expect = 8e-18
Identities = 346/525 (66%), Gaps = 17/525 (3%)
Strand=Plus/Minus
Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 94497
||||||||||| ||| | |||||||| |||||| | |||| ||||| | ||| ||
Sbjct 41519 TGGACTGCTGAGGAGATTGATCTCTCTAAGGATCTCCACGACTGGAACAACCGTCTGAAC 41460
Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557
|| | || || | ||||| |||| || || |||||||||| || ||||| ||
Sbjct 41459 AAAGACGAGCAGTACTTCATCTCCCACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATC 41400
Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616
|| || ||| || | | ||| | | |||||||| |||| | || || | |
Sbjct 41399 GTCAACGAAAATCTCGTTGAGCGCTTCTCAGGCGAGGTGCAGATCCCC-GAGGCCCGCTG 41341
Query 94617 CTTCTATGCGTATCAGTGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCA 94675
|||||| | | ||| |||| ||| ||| | || || || ||| || |
Sbjct 41340 CTTCTACGGTTTCCAGA-TCATGATGGAAAACATCCACTCTGAAACCTACTCGCTGCTGA 41282
Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCT-TTGAA-GCCATCCAAAC 94733
| |||| || || ||||| | || || || || || || ||||| | ||
Sbjct 41281 TTGACACCTACATCAAGGA--GCCCTCGCAACGCACATACCTGTTCAATGCCATTGACAC 41224
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTC 94790
|||| || || | || || || |||||| |||||||| | |||| ||||
Sbjct 41223 TATTCCCTGCATCCGCCGCAAGGCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTC 41164
Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850
| | ||||| |||| || | || ||||| ||| ||||| ||||| ||||| ||
Sbjct 41163 GA---CGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGG 41107
Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910
||||| | | || | ||||| ||||| ||||||||||| ||||| ||||||
Sbjct 41106 CGCCTTCGCCTCCATCTTCTGGCTGCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTC 41047
Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||||||||||| |||||||| ||||| || ||| || |||||
Sbjct 41046 AAACGAGCTTATTTCTCGTGATGAGGGCCTGCACACCGACTTTGC 41002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583251956308120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |