Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq411 351 1e-91 >seq411 Length=11963 Score = 351 bits (388), Expect = 1e-91 Identities = 880/1328 (66%), Gaps = 28/1328 (2%) Strand=Plus/Minus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566 ||||||||| || || |||||| |||| ||||||| |||||||| ||||| ||| Sbjct 8040 GAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTACGGTTCGAAGCACTC 7981 Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626 ||||| |||| ||||| | || ||| || ||||||||||| || || |||||||| Sbjct 7980 ATTGTTGCCCAAAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAACTAGAAGAGAATT 7921 Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAGG------CCGTCCCAAAATTCATTCGC 78680 || | ||||||| ||| |||| ||||||| | |||||| | ||| | | Sbjct 7920 GCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAGTCCCACAGGTCACTAGG 7861 Query 78681 CGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGT 78740 | | ||||||| || || | ||| || | ||| | || || |||| | || Sbjct 7860 AGTCACATCCCACATATCAAACTGCAAGATGCCTTGGGAGACAGGAGAACCCTCATAAGT 7801 Query 78741 CTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACAC 78800 ||||| |||||| || ||||| ||| ||| | || || |||||||| | Sbjct 7800 TGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGAT 7741 Query 78801 AGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAG 78860 | || || || ||||||||||| ||| || | | || || | | || ||| Sbjct 7740 GGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTTCAGGGGATTCAAAAGGCATGCGGAG 7681 Query 78861 CATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTT 78920 | ||| | || ||||||||||| || |||| | | || || |||||||||||||| Sbjct 7680 AGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAATGGGACGGTGGCGCATGTT 7621 Query 78921 GCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACG 78980 ||| || | || ||| | ||||| ||| |||||||| |||||| ||||| || Sbjct 7620 GCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACATCGATGATGCGGTTTAGGTTGCG 7561 Query 78981 CGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTCCTT--TG--- 79035 || || | || || |||| | || || ||| | | | |||| || Sbjct 7560 AACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCATACTCAC--CCTTGTTGTAG 7503 Query 79036 ---ATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTA 79092 | ||| | || ||| || ||||| ||||||||||| || ||| || ||| | Sbjct 7502 TCCACGAAGGAAGGAAGGGCGAGAGATGCTAGGTTGCACACAGCGACCTCATCAGGGGCA 7443 Query 79093 GAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTG--ATGGTGCCGATGTTCTTCT 79150 | |||||| || || ||||||| || || ||| ||||| || | || |||| Sbjct 7442 CAGTACTCGATAATCTCAGTGCACAGGTTCGA--ACTGCGAATGGTACCTAGATTTTTCT 7385 Query 79151 GGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCT 79210 | |||||||| ||| ||| ||| |||||| ||| | || | || |||||| || Sbjct 7384 GATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCT 7325 Query 79211 GACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCT 79270 || || |||| | | | ||| | | | ||||| ||||||| | || |||| Sbjct 7324 GAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTGACAACCATGCGACCGCGGCCCT 7265 Query 79271 GTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCG 79330 ||||| | |||| | | || | || |||||| ||| | || ||| | Sbjct 7264 CCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGG 7205 Query 79331 GGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGA 79390 |||| || | |||||||| || ||||||||| | ||||||||| || |||||| | Sbjct 7204 GGCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTCTTCTCAACACGCTTCATGAACA 7145 Query 79391 GGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGT 79450 ||| ||||||||||||| ||| ||||| || ||| | || || | || |||| Sbjct 7144 AGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGT 7085 Query 79451 TCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGA 79510 || || | ||||| || || | || || || ||||| ||||| ||||| ||||| | Sbjct 7084 TCTTGCGTAAGTCGAGGAACTCGAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAA 7025 Query 79511 ACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTC 79570 | | || |||||| || ||||||| || || ||||| |||||||||||||| | Sbjct 7024 AGGCTCCAGGTCGCTTGTTTCCACCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACAC 6965 Query 79571 GGAGCATGGGCACGATGCCGTCGGCGACG--CCGTTCGTCCCGTTGATTCGTGTACCGCT 79628 | |||||||| |||||||||| ||| | ||||| || || || | || | Sbjct 6964 GTAGCATGGGAACGATGCCGT--TCGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGT 6907 Query 79629 CGCCCGAAT--GTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCG 79686 || ||||| | | || || | || ||||| || || | | |||||| || || Sbjct 6906 GGCACGAATACGGT-GAACA-TTGAGACCGATACCACCAGCCATCTTGGAAATCATGGCA 6849 Query 79687 CACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAG 79746 || |||||| || ||||| ||||||||||| ||| |||||||| |||| ||||| Sbjct 6848 CAAGTCTTGAGGGTATCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCGACTAGGAAA 6789 Query 79747 CAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTG 79806 || |||| ||| | | | |||||||| || ||||| || || | ||||| ||| Sbjct 6788 CATGAAGACAACTGAGCCTGGGGAGTACCGGCATTAAAGAGCGTAGGTGATGCGTGAGTG 6729 Query 79807 AAGAACTT 79814 |||||||| Sbjct 6728 AAGAACTT 6721 Score = 230 bits (254), Expect = 3e-55 Identities = 870/1354 (64%), Gaps = 32/1354 (2%) Strand=Plus/Plus Query 19166 GAGACATACGACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAA 19224 || || ||| |||| ||| | || ||||||||||| ||||| | || || || || || Sbjct 6697 GAAACCTACAACCTTATGT-CTAGCAAGTTCTTCACTCACGCATCACCTACGCTCTTTAA 6755 Query 19225 CGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAG 19284 |||||||| | | | ||| |||| ||||||||||| | |||||||||||||| Sbjct 6756 TGCCGGTACTCCCCAGGCTCAGTTGTCTTCATGTTTCCTAGTCGACATGAAGGATGACAG 6815 Query 19285 CATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGG 19344 ||| |||||||| ||||| || |||||| || || || |||||| | | || || Sbjct 6816 CATCGAGGGCATTTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGGTGG 6875 Query 19345 TATCGGGATCCACTGCTCGAA-TATCCGGTCGAGTGGTACACGAATCAATGGGACGAACG 19403 |||||| || | || || ||| || | | ||| | || ||| || |||| Sbjct 6876 TATCGGTCTCAA-TGTTCACCGTATTCGTGCCACTGGCTCTTACATTGCTGGCACTAACG 6934 Query 19404 GAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCA 19463 | | |||| ||||| || ||||| || || ||||||||||| ||| | || || Sbjct 6935 GTACTTCGAACGGCATCGTTCCCATGCTACGTGTTTTCAACAACACCGCCCGTTATGTTG 6994 Query 19464 ACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGG 19523 ||||||| || ||| || || | || ||||| || |||||||||||||| || | Sbjct 6995 ACCAGGGTGGAAACAAGCGACCTGGAGCCTTTGCCATTTATCTCGAGCCATGGCATGCTG 7054 Query 19524 ACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCG 19583 | ||| | || |||||||| | ||| |||||| || | || || | || ||| | Sbjct 7055 ATGTCTTCGAGTTCCTCGACTTACGCAAGAACCACGGAAAGGAAGAAGTCCGTGCTCGTG 7114 Query 19584 ACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAG 19643 |||| ||| |||| ||||||| ||| | |||||| || ||||||||| | || | Sbjct 7115 ACCTATTCTTGGCCCTGTGGATCTGCGACTTGTTCATGAAGCGTGTTGAGAAGAATGAGG 7174 Query 19644 AATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGT 19703 | ||| || |||||||| | |||||||| ||| | | || ||| ||||| | || Sbjct 7175 ACTGGACTCTCATGTGCCCCAATGAATGCCCCGGCTTGGCGGATTGCTATGGCGAAGAGT 7234 Query 19704 TCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCG-GTTCAAGAAGGTGGTCCGGGCC 19762 | | | |||| | |||| ||||||| | || | ||| ||| |||| Sbjct 7235 TTGAGGCTCTGTATGAAAAGTACGAGAAGGAGGGCCGCGGTC-GCATGGTTGTCAAGGCC 7293 Query 19763 CGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGC 19822 | | | | ||| | | | || | ||| ||||| |||| || | ||| | Sbjct 7294 CAGAAACTGTGGTATGCCATTCTGGAGGCTCAGACTGAGACTGGCAACCCTTTTATGCTC 7353 Query 19823 TACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGAT--CAAGTCGT 19880 ||||| ||| | ||| |||| |||||||| || | || | || ||| | Sbjct 7354 TACAAAGACCACTGCAACCGCAAGAGCAATCAGAAAAATCTAGGTACCATTCGCAGT--T 7411 Query 19881 CCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATC 19940 | |||||||| ||||| || || ||| | || || ||| || ||||| || | Sbjct 7412 CGAACCTGTGCACTGAGATTATCGAGTACTGTGCCCCTGATGAGGTCGCTGTGTGCAACC 7471 Query 19941 TGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCC---------TTCGACTTTG 19991 | || || || ||| || | ||||| || || | | | |||||| Sbjct 7472 TAGCATCTCTCGCCCTTCCTTCCTTCGT---GGACTACAACAAGGGTGAGTATGACTTTA 7528 Query 19992 CCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGA 20051 || | |||| || |||| || || || || || || ||| |||||||| || Sbjct 7529 AAAAGCTACACGAAGTCACCCAAGTTGTTGTTCGCAACCTAAACCGCATCATCGATGTGA 7588 Query 20052 ACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCG 20111 | ||||| | ||| || | ||| || ||||||||||| || || | ||| Sbjct 7589 ATCACTACCCTGTCCAGGAAGCTCACAACAGCAACATGCGCCACCGTCCCATTGGTGTCG 7648 Query 20112 GCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCC--AA 20169 | || ||||||||||| |||| |||| | ||| || | | || || ||||| | Sbjct 7649 GTGTACAGGGCCTGGCTGACGCTTTCCTTGCTCTCCGCATGCCTTTTGA--ATCCCCTGA 7706 Query 20170 GGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATC 20229 || ||| ||||||||||| || || || || | |||||||| || || | || Sbjct 7707 AGCACGCCAGCTCAACAAGCAGATTTTTGAAACCATCTACCACGCCGCACTAACTGCTTC 7766 Query 20230 GTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGA 20289 ||| ||||| | ||| || | ||| || | |||| || || | ||| | Sbjct 7767 AATGGAAATCGCCCAGACGGAGGGTACTTACTCAACTTATGAGGGTTCTCCTGTCTCCCA 7826 Query 20290 GGGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGA------GTTTTGGAGCGC 20343 || ||| | ||| || ||||||| || ||| | ||| | |||| | Sbjct 7827 AGGCATCTTGCAGTTTGATATGTGGGATGTGACTCCTAGTGACCTGTGGGACTGGACTTC 7886 Query 20344 CCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCC 20403 || |||| |||| ||| || || | ||||| || | || || || |||||||| Sbjct 7887 TCTAAAGGAGAAGATTAAGCAGCATGGTGTACGCAATTCTCTTCTAGTTGCACCCATGCC 7946 Query 20404 GACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAA 20463 || ||| || | ||||| |||| ||||| ||| ||||| |||||||| |||| Sbjct 7947 TACAGCCAGCACGTCGCAGATTTTGGGCAACAATGAGTGCTTCGAACCGTACACATCCAA 8006 Query 20464 CATCTACTTGCGTCGTACACTGGCCGGTGAGTTC 20497 ||| ||| ||| || || || || |||||| Sbjct 8007 CATTTACCAGCGCCGCGTTCTTGCTGGCGAGTTC 8040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548516482992720