Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq411 257 2e-63
seq338 185 1e-41
seq145 145 9e-30
seq64 145 9e-30
seq160 82.4 9e-11
>seq411
Length=11963
Score = 257 bits (284), Expect = 2e-63
Identities = 1129/1759 (64%), Gaps = 67/1759 (4%)
Strand=Plus/Minus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| |||| || | |||||||||||||||||||| || |||||||| | ||||
Sbjct 8366 GCCTGCGTACGTAAGTAGTACATGCCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGC 8307
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| ||| ||| | | ||||| | | |||| ||||| |||||||| || ||
Sbjct 8306 ATGCTGGTGATCTTGCCCATGGTGGGATCTTTCATGTGAATGTTTAGAGACTGCGATTGG 8247
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCAT 80211
|||||||| |||||||| || ||||||| | || || || | ||| |||||
Sbjct 8246 TCAATGAAAGCACCACGATCAGCAGCCATTTGCACAACTGTACGCTGGGAAATCTCCCAA 8187
Query 80212 ACTGTACGATACAC--CTTACGAAGCTCCTCTGGAATG-TCCAGATTTT--GCACACTGC 80266
|| || |||| ||| || || | |||||| | |||| || | | ||
Sbjct 8186 ACGGTCTTGTACAGAGCTTT--AATATCAGCAGGAATGCTAGAGATGTTCTGGATGGAGC 8129
Query 80267 CACCGTCCTTTACAATTTGATTTTTCAATT---CAGACGTCCAGACACCAAGCTTGTGCA 80323
|| |||| | ||| |||| |||| | ||||| || | |||||| | | |
Sbjct 8128 CATTGTCCGCAATAATGCGATTCTTCATGTTGTCAGAC---CATAAACCAAGATCGACTA 8072
Query 80324 GATCTTTCACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCA 80380
| || | ||| | | ||| | | || |||| || || || ||| |||
Sbjct 8071 GGTCACGTAGAAGCCAGGGGTTGACGACCTGGA---ACTCGCCAGCAAGAACGCGGCGCT 8015
Query 80381 GATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGC 80440
| || | ||| | ||||| || || || ||| ||||| || | ||||| | |||||
Sbjct 8014 GGTAAATGTTGGATGTGTACGGTTCGAAGCACTCATTGTTGCCCAAAATCTGCGACGTGC 7955
Query 80441 TCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCT 80500
| || || ||||| || | || | || ||||| || | || |||| ||| || | ||
Sbjct 7954 TGGCTGTAGGCATGGGTGCAACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCT 7895
Query 80501 CGCGCAAATCTGACCAAAAATCAACCCCAA--CGCT----GTGAC--CCCACATGTCGTG 80552
| | | | ||| || || || | || || || ||||||| ||
Sbjct 7894 CCTTTAGAGAAGTCCAG---TC--CCACAGGTCACTAGGAGTCACATCCCACATATCAAA 7840
Query 80553 CTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTT 80612
|||||||||||| | || | ||||| ||| | | || ||| | ||||||||||
Sbjct 7839 CTGCAAGATGCCTTGGGAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTG 7780
Query 80613 GGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTT 80672
||| | || || | | || || ||||| || ||| ||||| | ||||||
Sbjct 7779 GGCGATTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTT 7720
Query 80673 CACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAG 80732
| ||| || | ||| || || | || || | | ||| ||||||||||
Sbjct 7719 GAGCTGGCGTGCTTCAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAG 7660
Query 80733 GCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGAA 80791
|||||| || |||| | || || ||||||||| |||| | | | | || ||| | |
Sbjct 7659 GCCCTGTACACCGACACCAATGGGACGGTGGCGCATGTTGCTGTTG-TGAGCTTCCTGGA 7601
Query 80792 TTGGGTAAAAGTTATT---ATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAA 80848
||||| || ||| |||||||| |||||| |||||||| |||||| | || |
Sbjct 7600 CAGGGTA---GTGATTCACATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGA 7544
Query 80849 CATCATGAAGTTTCTGAAAGTCGAATTG------GTTCCCCTTCACAAATGCCGGAAGGC 80902
| || || || || | |||||| | | ||| | ||| || | ||||||
Sbjct 7543 CTTCGTGTAGCTTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGG 7484
Query 80903 TCAGGGACGCCAGATTGCACACGGCCACCTCTTCAG---CATCTGTAAACTCGACGATTT 80959
|| || || || |||||||| || ||||| |||| || | ||| ||||| || |
Sbjct 7483 CGAGAGATGCTAGGTTGCACACAGCGACCTCATCAGGGGCA-CAGTA--CTCGATAATCT 7427
Query 80960 CCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGC 81019
| ||||||| || ||| ||| ||||| || |||||||| || |||| |||||
Sbjct 7426 CAGTGCACAGGTTCGAACTGCGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGC 7367
Query 81020 AAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGT 81079
| ||| |||||| ||| | ||| | || ||||| ||| | || || ||||| |
Sbjct 7366 AGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCAT 7307
Query 81080 CCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGT 81139
||| | | | |||||||| ||| |||| ||| || | | ||||| | |
Sbjct 7306 ACCACAGTTTCTGGGCCTTGACAACCATGCGACCGCGGCCCTCCTTCTCGTACTTTTCAT 7247
Query 81140 AAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACA 81199
| | || |||| | || | || | | | | ||||| || || |||||||
Sbjct 7246 ACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCACA 7187
Query 81200 TCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGG 81259
| || |||||| | ||||| ||| ||||||||| ||| |||||| ||||
Sbjct 7186 TGAGAGTCCAGTCCTCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGG 7127
Query 81260 CGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGA 81318
| ||| ||||| || ||| || | || || | || ||||| ||| || |||||
Sbjct 7126 CCAAGAATAGGTCACGAGCA-CGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGG 7068
Query 81319 AAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACGG 81378
|| || | || || |||||||||||||| ||||| | ||| | | || || |
Sbjct 7067 AACTCGAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTG 7008
Query 81379 ---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATA 81435
|||||||||| || |||||||| || ||| || ||||| | ||| || | |||
Sbjct 7007 TTTCCACCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATG 6948
Query 81436 CCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG--CACCTTGCTGA 81493
|| | || |||||| || || | || || || |||| || || || |
Sbjct 6947 CCGTTCGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACA 6888
Query 81494 TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCAT 81553
||| |||||||| ||||| | | ||| |||||| ||||| || | ||| || |
Sbjct 6887 TTG--AGACCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGT 6830
Query 81554 AAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGC 81613
|||| ||||||||||| || | |||||||| | | |||||| |||| |||| ||
Sbjct 6829 AAATGCCCTCGATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGA--GC 6772
Query 81614 TTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACAT 81671
| ||| |||||||| || || || || | |||||| |||| | | | |||||
Sbjct 6771 CTGGGGAGTACCGGCATTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTAGACAT 6712
Query 81672 CAGGTCATAGGTTTCCTTGACGCG-TGGAATATCGTCACCGTGAATACCGATAGCTACAC 81730
|||| |||||||| || || | || | | |||||| |||||| | ||| ||||
Sbjct 6711 AAGGTTGTAGGTTTCAAGCACACGATCGACT-TTGTCACCCCAAATACCCACAGCAACAC 6653
Query 81731 GCATAAACATGTACTGGGG 81749
|||| | ||||| ||||||
Sbjct 6652 GCATTATCATGTGCTGGGG 6634
>seq338
Length=64627
Score = 185 bits (204), Expect = 1e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| | || |||||||| ||||| || || || ||||| |
Sbjct 52467 ATGCAAATCTTCGTCAAGACCTTGACGGGCAAGACCATTACCCTCGAAGTCGAGTCCTCT 52408
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| ||| | ||| | || || ||||| |||||||| || || || || |||
Sbjct 52407 GATACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCCCCGGATCAG 52348
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| ||||||||||| ||||| |||||||||| |||||||| | ||||| ||
Sbjct 52347 CAGCGTCTCATTTTTGCTGGAAAGCAGCTCGAGGATGGCCGTACCCTTTCGGACTACAAC 52288
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || || ||||| |||||||| | || ||||||| || |||||
Sbjct 52287 ATTCAGAAAGAATCTACTCTTCACTTGGTTCTGCGTCTGCGTGGTGG 52241
Score = 172 bits (190), Expect = 6e-38
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| | || |||||||| ||||| || || || ||||| |
Sbjct 52239 ATGCAAATCTTCGTCAAGACCTTGACGGGCAAGACCATTACCCTCGAAGTCGAGTCCTCT 52180
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| ||| | || | || || |||||||||||||| || ||||| || |||
Sbjct 52179 GATACCATTGACAATGTCAAATCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAG 52120
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||||| || ||||| | ||||| ||
Sbjct 52119 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 52060
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| || |||||||| | || ||||||| || ||||| ||
Sbjct 52059 ATCCAGAAGGAGTCTACTCTTCACTTGGTTCTGCGTCTGCGTGGTGGCCA 52010
Score = 161 bits (178), Expect = 1e-34
Identities = 166/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 27416 TTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTG 27475
|||||||||| |||||||| ||||| ||||| || || || ||||| || | |||||
Sbjct 52685 TTGTCAAGACCCTTACCGGAAAGACCATTACCCTCGAAGTCGAGTCCTCCGACACCATTG 52626
Query 27476 CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAA 27535
|| | ||| | || || |||||||||||||| || ||||| |||||||||||||| |
Sbjct 52625 ACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGTCTCA 52566
Query 27536 TTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595
| || || || ||||| || ||||||| || ||||| | ||||| || | || || |
Sbjct 52565 TCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATTCAGAAAG 52506
Query 27596 AATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| | ||| ||||||| || |||||
Sbjct 52505 AATCTACTCTTCACTTGGTCCTGCGTCTGCGTGGTGG 52469
Score = 145 bits (160), Expect = 9e-30
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| |||||||| || || || ||||| ||||| |||| |||| || | ||| ||
Sbjct 52955 ACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGATACTATTGACAACGTTAAGTCT 52896
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||| || ||||| |||||||||||||| || || ||||| |||
Sbjct 52895 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGTCTCATCTTCGCTGGAAAG 52836
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||||| || ||||| | ||||| || | || ||||| || ||||| |||
Sbjct 52835 CAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCTACTCTCCAT 52776
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
||||| | || || || |||||
Sbjct 52775 CTAGTGCTCCGCCTGCGTGGTGG 52753
>seq145
Length=91869
Score = 145 bits (160), Expect = 9e-30
Identities = 146/190 (77%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| ||||| || ||||| ||||| || |||||||||||
Sbjct 6209 ATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTCG 6150
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| | || ||||||||||||||||| ||||| || ||||||
Sbjct 6149 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 6090
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || ||||| ||||| || ||||||| || ||||| | ||||| ||
Sbjct 6089 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGTCTGACTACAAC 6030
Query 27586 GTCCAAAAGG 27595
| || ||||
Sbjct 6029 ATTCAGAAGG 6020
>seq64
Length=146407
Score = 145 bits (160), Expect = 9e-30
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || || ||||| ||||| || ||||| ||||| || | ||
Sbjct 70747 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCTTCGGACACGATC 70806
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||| | || || |||||||||||||| ||||| || ||||||||||| |
Sbjct 70807 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCTTG 70866
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| |||||||||||||| || ||||||| || || || | ||||| || |||| |||
Sbjct 70867 ATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAG 70926
Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||||| || || || ||| |||| || || |||||
Sbjct 70927 GAGTCCACCCTCCACCTTGTCCTGCGCCTGCGTGGTGG 70964
>seq160
Length=132817
Score = 82.4 bits (90), Expect = 9e-11
Identities = 168/247 (68%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 31983 GGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCT-GT 32041
||| ||| | |||||| ||||| ||||| || ||||| ||| ||| || ||| | ||
Sbjct 25694 GGATGGCTTTAAGCCTGGTCAGCGGAAGGTCATTTACGCGTGCTTCAGCAAAAACATTGT 25635
Query 32042 CGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACC 32101
| || || |||||||| | ||||| | || | || | | || || |||| || |
Sbjct 25634 CCAG-GATATGAAGGTTGTTGAGCTGGCTGGTTTTGTTTCTGGACATACCTCCTACCAAC 25576
Query 32102 ACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAA 32161
|||| || | || || || |||||| | || |||||| ||||||||||| | |
Sbjct 25575 ACGGAGAAGTATCCCTACAACAAACCATTATTGGTCTGGCTCAGGACTTTGTCGGTTCCA 25516
Query 32162 ATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGG 32221
| ||| | |||| || ||||| ||| | || || | || || || ||||| ||
Sbjct 25515 ACAACATAAACTGTCTGGAGCCCAGTGGTAACTTCGGTTCGCGTCTTGCTGGTGGTTCGG 25456
Query 32222 ATGCTGC 32228
|||||||
Sbjct 25455 ATGCTGC 25449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570301752668560
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