Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_028956.1 Length=52139 Score E Sequences producing significant alignments: (Bits) Value seq1144 87.8 6e-13 >seq1144 Length=416 Score = 87.8 bits (96), Expect = 6e-13 Identities = 221/328 (67%), Gaps = 6/328 (2%) Strand=Plus/Minus Query 40757 GTTTTCCATCAAGTAAGGTTGCCATCGGTGTTCTGCCACAGCACATTTTTCCTTGATGTG 40816 ||||| |||||| || ||| ||| || ||| | ||| | || |||||| ||||| Sbjct 377 GTTTTGAATCAAGGAAAGTTTGCATAGGAGTTTTTCCATAACAGTGCTTTCCTGAATGTG 318 Query 40817 TTCGATGGTGATTATAATACATTAA-CCACTCATCTAAATCCGCTTGTAATGTCGT-TAA 40874 ||| || ||| || | ||||| ||| ||| | ||| ||| || || | || Sbjct 317 TTCTTTGAGTATTGTACTT-ATTAATCCATAAATCAACATCAATTTGCAAC-TCTTCTAC 260 Query 40875 ATCCGTATAAATTTTCTTCCTAAATGCCACTTGGTAAAATTCTTGTAAGATTGTTTTATG 40934 | | || ||| | || | ||| || | | |||||||||||| || ||| |||| Sbjct 259 AGAGCTGTATATTCTTTTACGAAAAGCTATATCATAAAATTCTTGTTTCATAGTTCTATG 200 Query 40935 GAACCGTTCGCAGATACCATTCGTCTG-GGGATGCTTCACTTTCGTTTTCGTATGCTCTA 40993 ||||| || || |||||||| || || ||| | | | || || ||||| ||||| |||| Sbjct 199 GAACCTCTCACAAATACCATTGGTTTGTGGGCTACGT-ACCTTTGTTTTGGTATGATCTA 141 Query 40994 TGTCATTTATCGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCAC 41053 | | | || | ||||| | | ||| | || | |||| || || ||||||||| Sbjct 140 TATTTTCGATGCCCAAATACAATTGATATGCATGGTGTTCTGGTTTACCGCAATATTCAG 81 Query 41054 TTCCTCGGTCAGTTAATATGCGTAACAT 41081 | || |||||||| | ||| |||| ||| Sbjct 80 TACCACGGTCAGTCAGTATACGTAGCAT 53 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166720798456506