Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq145 91.5 1e-13
>seq145
Length=91869
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| || ||||| ||||| || ||||| || ||||| ||||| |||
Sbjct 6212 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 6153
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
||||||| | || ||| | || | || ||| ||||| || || | || || ||
Sbjct 6152 TCGGACACCATCGACAATGTCAAGTC-CAAGATTCAGGACAAGGAGGGCATTCCCCCGGA 6094
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| ||||| | || || || ||||| || ||||| || | ||||| | || ||
Sbjct 6093 CCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGTCTGACTA 6034
Query 23787 CAACATACAAAA 23798
|||||| || ||
Sbjct 6033 CAACATTCAGAA 6022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338004603056204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |