Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq411 212 9e-50 >seq411 Length=11963 Score = 212 bits (234), Expect = 9e-50 Identities = 1183/1867 (63%), Gaps = 51/1867 (3%) Strand=Plus/Minus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 ||||||| |||||||| || || || ||||| || |||| || || |||||||| Sbjct 8360 GTACGTAAGTAGTACATGCCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGCATGCTG 8301 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931 || | ||| | ||||| || ||||| || | ||||| ||| || ||| Sbjct 8300 GTGATCTTGCCCATGGTGGGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATG 8241 Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991 ||||| || | |||||| ||||||| | || || || | ||| ||||||| || Sbjct 8240 AAAGCACCACGATCAGCAGCCATTTGCACAACTGTACGCTGGGAAATCTCCCAAACGGTC 8181 Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCT 77048 ||| | | ||| |||||| | |||| | | | | || || ||||| ||| || Sbjct 8180 TTGTACAGAGCTTTAATATCAGCAGGAATGCTAGAGATGTTCTGGATGGAGCCATTGTCC 8121 Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGG 77108 | ||||| |||||| || | ||| ||| || || || | | || Sbjct 8120 GCAATAATGCGATTCTTCATGTTGTCAGACCATAAACCAAGATCGACTAGGTCACGTAGA 8061 Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168 || || || || | || || || |||| | || | || |||||| || Sbjct 8060 AGCCAGGGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGAT 8001 Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228 || || ||||| | | |||||||| |||||||| || | || || || ||||| Sbjct 8000 GTGTACGGTTCGAAGCACTCATTGTTGCCCAAAATCTGCGACGTGCTGGCTGTAGGCATG 7941 Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTT 77287 ||||| || | | | ||| | | |||||| || | | || || || |||||| | | Sbjct 7940 GGTGCAACTAGAAGAGAATTGCGTACACCATGCTGCT-TAATCTTCTCCTTTAGAGAAGT 7882 Query 77288 CCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACT 77347 ||| ||||| || || ||| |||||||| | ||| | || | || || || Sbjct 7881 CCAGTCCCACAGGTCACTAGGAGTCACATCCCACATATCAAACTGCAAGATGCC-TTGGG 7823 Query 77348 AG-CATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACA---AC 77403 || || || || | ||| ||| |||| || || || | || | ||| || | Sbjct 7822 AGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTC-CATTGAA 7764 Query 77404 TCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTT 77463 | || | ||| ||| || || ||||| ||||||| ||| ||||| | |||||| Sbjct 7763 GCAGTT--AGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTT 7706 Query 77464 CAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAA 77523 || ||||| || | | | || || || || || | ||||| || || | Sbjct 7705 CAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGA 7646 Query 77524 TACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAA 77583 |||||| || | || | | | ||| | | |||||| | | ||| || | ||| | Sbjct 7645 CACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCA 7586 Query 77584 TGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAA 77643 || || || || || || | |||||| |||| || || | ||| || || Sbjct 7585 CATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAA 7526 Query 77644 AATCAAA-TCTTCCATCTATAA---CAAACATGTTCAAAG--CTATAGATGCTAGATTAC 77697 | ||| | || || | | | || | | ||| | | ||||||||| || | Sbjct 7525 AGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCGAGAGATGCTAGGTTGC 7466 Query 77698 AAACTGCTACCTCATTAGCGTTGGCA---TATTGTATTATCTCGGTACATAGATTACTAC 77754 | || || ||||||| || | ||| || | || ||||| || || || || || Sbjct 7465 ACACAGCGACCTCATCAGGG---GCACAGTACTCGATAATCTCAGTGCACAGGTTCGAAC 7409 Query 77755 ATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAA 77814 || || || ||||||| || |||||||| ||||| ||| || || || | Sbjct 7408 TGCGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCA 7349 Query 77815 TAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTT 77874 |||| || | || || ||| |||| | || | ||| | | ||| | | ||| | Sbjct 7348 TAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACA-GTTTCTGGGCC 7290 Query 77875 TTATCATAGATTTGTATCGCCTCTCTCTTTCA--TA--TTGAGTATATAGCCGTTCAAAT 77930 || || || | | ||| | ||| ||| || || || | |||| ||||| Sbjct 7289 TTGACAACCATGCG-ACCGCGGCCCTCCTTCTCGTACTTTTCATACAGAGCC--TCAAAC 7233 Query 77931 TCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCA 77990 || || || | ||| |||| || ||||||||||| |||||||| | | |||||| Sbjct 7232 TCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCC 7173 Query 77991 CCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 78050 ||| | || ||| || ||||| || | || ||||| || || | ||||| || Sbjct 7172 TCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCA 7113 Query 78051 CGGGTTCTATGTTCTTCATTTCCTGTATTCTT-TTTAAGATCGAGAAACTCCATAATATC 78109 || | | |||||| ||||| ||||| |||| ||||| ||||| | | ||| Sbjct 7112 CGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAG-TCGAGGAACTCGAAGACATC 7054 Query 78110 AGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATC 78169 || ||||||||| || ||||| || || | |||||||||| || || || ||||| || Sbjct 7053 AGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCCTGGTC 6994 Query 78170 TATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCC 78229 | ||| | ||||||||| || |||| | | ||| |||| || ||||| || || || Sbjct 6993 AACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCGAAGTACC 6934 Query 78230 ATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATA--TTACTAATGGATATCCCTATT 78287 || || |||| ||| ||| ||| | || |||||| | || || | || || Sbjct 6933 GTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGA--CCGATA 6876 Query 78288 CCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATA 78347 || || |||||||| || || | || ||| || | |||||||| || ||||| || Sbjct 6875 CCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCCCTCGATG 6816 Query 78348 CTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 78407 ||||||||| |||||| | || ||||| ||||| ||| || ||| || ||| Sbjct 6815 CTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGTACCGGCA 6756 Query 78408 TTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 78467 ||||| | || || ||||| || || || | || ||| | || ||||| |||||| Sbjct 6755 TTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTAGACATAAGGTTGTAGGTTTCA 6696 Query 78468 A-TAGCTGAT--TCTATGT---CCCATTGATGAATTCCTACCGCTACACGCATCAACATA 78521 | | ||| || ||| |||| ||| || || || |||||||| | ||| Sbjct 6695 AGCACACGATCGACTTTGTCACCCCA------AATACCCACAGCAACACGCATTATCATG 6642 Query 78522 TGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTT 78581 ||||| || | ||||| ||||| || | ||| | | ||| || || | || Sbjct 6641 TGCTGGGGACGCTCAACAATCTTACCATCAAGTTTGAGTAGGTACGAACGCTCGAGCGTC 6582 Query 78582 TTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTA 78641 ||||| ||||| || | ||| ||||| | ||||| | ||| |||| | || | | Sbjct 6581 TTAAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTACACAATGGCAGAGTCCAGCTCA 6522 Query 78642 TCTTTGT 78648 || |||| Sbjct 6521 TCCTTGT 6515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694658267084320