Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq411 212 9e-50
>seq411
Length=11963
Score = 212 bits (234), Expect = 9e-50
Identities = 1183/1867 (63%), Gaps = 51/1867 (3%)
Strand=Plus/Minus
Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871
||||||| |||||||| || || || ||||| || |||| || || ||||||||
Sbjct 8360 GTACGTAAGTAGTACATGCCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGCATGCTG 8301
Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931
|| | ||| | ||||| || ||||| || | ||||| ||| || |||
Sbjct 8300 GTGATCTTGCCCATGGTGGGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATG 8241
Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991
||||| || | |||||| ||||||| | || || || | ||| ||||||| ||
Sbjct 8240 AAAGCACCACGATCAGCAGCCATTTGCACAACTGTACGCTGGGAAATCTCCCAAACGGTC 8181
Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCT 77048
||| | | ||| |||||| | |||| | | | | || || ||||| ||| ||
Sbjct 8180 TTGTACAGAGCTTTAATATCAGCAGGAATGCTAGAGATGTTCTGGATGGAGCCATTGTCC 8121
Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGG 77108
| ||||| |||||| || | ||| ||| || || || | | ||
Sbjct 8120 GCAATAATGCGATTCTTCATGTTGTCAGACCATAAACCAAGATCGACTAGGTCACGTAGA 8061
Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168
|| || || || | || || || |||| | || | || |||||| ||
Sbjct 8060 AGCCAGGGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGAT 8001
Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228
|| || ||||| | | |||||||| |||||||| || | || || || |||||
Sbjct 8000 GTGTACGGTTCGAAGCACTCATTGTTGCCCAAAATCTGCGACGTGCTGGCTGTAGGCATG 7941
Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTT 77287
||||| || | | | ||| | | |||||| || | | || || || |||||| | |
Sbjct 7940 GGTGCAACTAGAAGAGAATTGCGTACACCATGCTGCT-TAATCTTCTCCTTTAGAGAAGT 7882
Query 77288 CCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACT 77347
||| ||||| || || ||| |||||||| | ||| | || | || || ||
Sbjct 7881 CCAGTCCCACAGGTCACTAGGAGTCACATCCCACATATCAAACTGCAAGATGCC-TTGGG 7823
Query 77348 AG-CATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACA---AC 77403
|| || || || | ||| ||| |||| || || || | || | ||| || |
Sbjct 7822 AGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTC-CATTGAA 7764
Query 77404 TCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTT 77463
| || | ||| ||| || || ||||| ||||||| ||| ||||| | ||||||
Sbjct 7763 GCAGTT--AGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTT 7706
Query 77464 CAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAA 77523
|| ||||| || | | | || || || || || | ||||| || || |
Sbjct 7705 CAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGA 7646
Query 77524 TACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAA 77583
|||||| || | || | | | ||| | | |||||| | | ||| || | ||| |
Sbjct 7645 CACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCA 7586
Query 77584 TGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAA 77643
|| || || || || || | |||||| |||| || || | ||| || ||
Sbjct 7585 CATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAA 7526
Query 77644 AATCAAA-TCTTCCATCTATAA---CAAACATGTTCAAAG--CTATAGATGCTAGATTAC 77697
| ||| | || || | | | || | | ||| | | ||||||||| || |
Sbjct 7525 AGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCGAGAGATGCTAGGTTGC 7466
Query 77698 AAACTGCTACCTCATTAGCGTTGGCA---TATTGTATTATCTCGGTACATAGATTACTAC 77754
| || || ||||||| || | ||| || | || ||||| || || || || ||
Sbjct 7465 ACACAGCGACCTCATCAGGG---GCACAGTACTCGATAATCTCAGTGCACAGGTTCGAAC 7409
Query 77755 ATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAA 77814
|| || || ||||||| || |||||||| ||||| ||| || || || |
Sbjct 7408 TGCGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCA 7349
Query 77815 TAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTT 77874
|||| || | || || ||| |||| | || | ||| | | ||| | | ||| |
Sbjct 7348 TAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACA-GTTTCTGGGCC 7290
Query 77875 TTATCATAGATTTGTATCGCCTCTCTCTTTCA--TA--TTGAGTATATAGCCGTTCAAAT 77930
|| || || | | ||| | ||| ||| || || || | |||| |||||
Sbjct 7289 TTGACAACCATGCG-ACCGCGGCCCTCCTTCTCGTACTTTTCATACAGAGCC--TCAAAC 7233
Query 77931 TCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCA 77990
|| || || | ||| |||| || ||||||||||| |||||||| | | ||||||
Sbjct 7232 TCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCC 7173
Query 77991 CCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 78050
||| | || ||| || ||||| || | || ||||| || || | ||||| ||
Sbjct 7172 TCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCA 7113
Query 78051 CGGGTTCTATGTTCTTCATTTCCTGTATTCTT-TTTAAGATCGAGAAACTCCATAATATC 78109
|| | | |||||| ||||| ||||| |||| ||||| ||||| | | |||
Sbjct 7112 CGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAG-TCGAGGAACTCGAAGACATC 7054
Query 78110 AGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATC 78169
|| ||||||||| || ||||| || || | |||||||||| || || || ||||| ||
Sbjct 7053 AGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCCTGGTC 6994
Query 78170 TATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCC 78229
| ||| | ||||||||| || |||| | | ||| |||| || ||||| || || ||
Sbjct 6993 AACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCGAAGTACC 6934
Query 78230 ATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATA--TTACTAATGGATATCCCTATT 78287
|| || |||| ||| ||| ||| | || |||||| | || || | || ||
Sbjct 6933 GTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGA--CCGATA 6876
Query 78288 CCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATA 78347
|| || |||||||| || || | || ||| || | |||||||| || ||||| ||
Sbjct 6875 CCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCCCTCGATG 6816
Query 78348 CTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 78407
||||||||| |||||| | || ||||| ||||| ||| || ||| || |||
Sbjct 6815 CTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGTACCGGCA 6756
Query 78408 TTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 78467
||||| | || || ||||| || || || | || ||| | || ||||| ||||||
Sbjct 6755 TTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTAGACATAAGGTTGTAGGTTTCA 6696
Query 78468 A-TAGCTGAT--TCTATGT---CCCATTGATGAATTCCTACCGCTACACGCATCAACATA 78521
| | ||| || ||| |||| ||| || || || |||||||| | |||
Sbjct 6695 AGCACACGATCGACTTTGTCACCCCA------AATACCCACAGCAACACGCATTATCATG 6642
Query 78522 TGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTT 78581
||||| || | ||||| ||||| || | ||| | | ||| || || | ||
Sbjct 6641 TGCTGGGGACGCTCAACAATCTTACCATCAAGTTTGAGTAGGTACGAACGCTCGAGCGTC 6582
Query 78582 TTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTA 78641
||||| ||||| || | ||| ||||| | ||||| | ||| |||| | || | |
Sbjct 6581 TTAAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTACACAATGGCAGAGTCCAGCTCA 6522
Query 78642 TCTTTGT 78648
|| ||||
Sbjct 6521 TCCTTGT 6515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694658267084320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |