Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq680 199 4e-46 >seq680 Length=821847 Score = 199 bits (220), Expect = 4e-46 Identities = 492/728 (68%), Gaps = 24/728 (3%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| |||| ||| || || ||||| ||||| || ||||| | ||||| || |||||| Sbjct 341150 TGGTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCC 341091 Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||| || || || || || || || | | |||| | | || || || | | Sbjct 341090 ATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGG--TTGCCAAGAGCGAGCAGCA 341033 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAA-TTCGCAGTTCATTCCTATAAGA 16852 || || || ||||| || || || |||||||| | || || |||||| || | || Sbjct 341032 GTCGGTCAGCGACAAACTCAATGTACTGGCACATGAGCTTAGC-GTTCATGCCGAGCAGC 340974 Query 16853 -CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 || | || ||||| || ||||| ||| |||||| || |||| || ||| || || Sbjct 340973 GCGCAA-GGCAGAGCATCGGTCAAGAATTCTTGCTCAATGGCAACGGCCTCCACGATGAT 340915 Query 16912 ACTA-GCAACTCGTTC--CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGC 16968 || ||| || | || || || | | || || || |||| ||| || || Sbjct 340914 GCTTTGCA---CGACCGACTTGGCGGGCTTGTTCTTGAGGTGAGAGAACAGCAGGCAAGC 340858 Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028 ||| || || | |||||||| | | ||| || ||||| || || || | || | Sbjct 340857 GAAGTCAGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGC 340798 Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088 ||| || || ||||| ||||| || || | ||||| || || || ||||| ||||| Sbjct 340797 CATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGAGCCGGAGAAGAAGATACC 340738 Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCC 17147 |||||| | ||||| ||||| ||||| ||| | || | ||| |||| ||| |||| Sbjct 340737 CTCGACAGCAGCAAAGGCGATCAATCGCATAGCGAAAGTAGAGTCCTTGTC-CGAGATCC 340679 Query 17148 ATTTCTGCACCCACTCGGCTTTT-TGCTTTATGCAATCCATCGTTTCTATGGCCTTAAAT 17206 || | | |||| || || ||| ||| || ||| || | || ||||| || || Sbjct 340678 ATCGCAGTGCCCAGTCAGCCTTTCTGCGG-ATACAAGGGATGTTGTCGATGGCGTTGAAG 340620 Query 17207 AATTTCTCTTTTTCCTG--TAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATT 17263 | | | || ||| | || ||| | || || || |||||||| ||| ||| | Sbjct 340619 AGGTA---TGTTCGCTGCTTGGGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATGTC 340563 Query 17264 TCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATT 17323 |||||||| ||||||||||| ||||| || ||||| |||||||| || |||| |||| Sbjct 340562 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGTATT 340503 Query 17324 TGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCG 17383 || || || || |||||| || | || || ||||| || ||||||||| |||||| Sbjct 340502 TGCACCTCGGCGCTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGATGCGGCG 340443 Query 17384 AAAAACGC 17391 || || || Sbjct 340442 AAGAATGC 340435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517533017172600