Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq680 199 4e-46
>seq680
Length=821847
Score = 199 bits (220), Expect = 4e-46
Identities = 492/728 (68%), Gaps = 24/728 (3%)
Strand=Plus/Minus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| |||| ||| || || ||||| ||||| || ||||| | ||||| || ||||||
Sbjct 341150 TGGTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCC 341091
Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
||||| || || || || || || || | | |||| | | || || || | |
Sbjct 341090 ATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGG--TTGCCAAGAGCGAGCAGCA 341033
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAA-TTCGCAGTTCATTCCTATAAGA 16852
|| || || ||||| || || || |||||||| | || || |||||| || | ||
Sbjct 341032 GTCGGTCAGCGACAAACTCAATGTACTGGCACATGAGCTTAGC-GTTCATGCCGAGCAGC 340974
Query 16853 -CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911
|| | || ||||| || ||||| ||| |||||| || |||| || ||| || ||
Sbjct 340973 GCGCAA-GGCAGAGCATCGGTCAAGAATTCTTGCTCAATGGCAACGGCCTCCACGATGAT 340915
Query 16912 ACTA-GCAACTCGTTC--CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGC 16968
|| ||| || | || || || | | || || || |||| ||| || ||
Sbjct 340914 GCTTTGCA---CGACCGACTTGGCGGGCTTGTTCTTGAGGTGAGAGAACAGCAGGCAAGC 340858
Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028
||| || || | |||||||| | | ||| || ||||| || || || | || |
Sbjct 340857 GAAGTCAGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGC 340798
Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088
||| || || ||||| ||||| || || | ||||| || || || ||||| |||||
Sbjct 340797 CATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGAGCCGGAGAAGAAGATACC 340738
Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCC 17147
|||||| | ||||| ||||| ||||| ||| | || | ||| |||| ||| ||||
Sbjct 340737 CTCGACAGCAGCAAAGGCGATCAATCGCATAGCGAAAGTAGAGTCCTTGTC-CGAGATCC 340679
Query 17148 ATTTCTGCACCCACTCGGCTTTT-TGCTTTATGCAATCCATCGTTTCTATGGCCTTAAAT 17206
|| | | |||| || || ||| ||| || ||| || | || ||||| || ||
Sbjct 340678 ATCGCAGTGCCCAGTCAGCCTTTCTGCGG-ATACAAGGGATGTTGTCGATGGCGTTGAAG 340620
Query 17207 AATTTCTCTTTTTCCTG--TAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATT 17263
| | | || ||| | || ||| | || || || |||||||| ||| ||| |
Sbjct 340619 AGGTA---TGTTCGCTGCTTGGGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATGTC 340563
Query 17264 TCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATT 17323
|||||||| ||||||||||| ||||| || ||||| |||||||| || |||| ||||
Sbjct 340562 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGTATT 340503
Query 17324 TGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCG 17383
|| || || || |||||| || | || || ||||| || ||||||||| ||||||
Sbjct 340502 TGCACCTCGGCGCTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGATGCGGCG 340443
Query 17384 AAAAACGC 17391
|| || ||
Sbjct 340442 AAGAATGC 340435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517533017172600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |