Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq660 89.7 6e-13 >seq660 Length=72284 Score = 89.7 bits (98), Expect = 6e-13 Identities = 194/288 (67%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 ||||||||||| ||| | | ||| ||||| |||| ||||| || ||||| || Sbjct 46141 ACGTAGAACTGAGCAAAC-ATGTGACAGGGTGGCAAAGCCATCTTCTTCATATCCGCAGG 46083 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 |||||||| | | || || | |||| | ||||| |||||| || || | Sbjct 46082 ATTCCAGGCAGACATGATGATGCGCCTGTCGTAAGGGTTGTTCTTGAGCTTGTGAATGAC 46023 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048 || ||||| ||||| || || || || || || | | ||||| |||| |||| Sbjct 46022 CTCAGCCAGCTGATCCACTCCTTGTCCAGTATAGTCGGTGTGGCAGTCCTTGTACTCGGC 45963 Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108 ||||| |||||||| |||||||||||||| ||||| ||||| || || | ||| Sbjct 45962 ACCGAAATGCCTCCATTGGAACCCGTAGACTGGCCCAAGGTCGCCTTCTTCACGGTGGGA 45903 Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGAT 146156 || ||| | | | ||||| | || | ||| || || | ||||| || Sbjct 45902 AAGGCCGACGCTGTCGAGGTATTCTCTGGATCCATTACCATCCCAAAT 45855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590062453757800