Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq660 89.7 6e-13
>seq660
Length=72284
Score = 89.7 bits (98), Expect = 6e-13
Identities = 194/288 (67%), Gaps = 2/288 (1%)
Strand=Plus/Minus
Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928
||||||||||| ||| | | ||| ||||| |||| ||||| || ||||| ||
Sbjct 46141 ACGTAGAACTGAGCAAAC-ATGTGACAGGGTGGCAAAGCCATCTTCTTCATATCCGCAGG 46083
Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988
|||||||| | | || || | |||| | ||||| |||||| || || |
Sbjct 46082 ATTCCAGGCAGACATGATGATGCGCCTGTCGTAAGGGTTGTTCTTGAGCTTGTGAATGAC 46023
Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048
|| ||||| ||||| || || || || || || | | ||||| |||| ||||
Sbjct 46022 CTCAGCCAGCTGATCCACTCCTTGTCCAGTATAGTCGGTGTGGCAGTCCTTGTACTCGGC 45963
Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108
||||| |||||||| |||||||||||||| ||||| ||||| || || | |||
Sbjct 45962 ACCGAAATGCCTCCATTGGAACCCGTAGACTGGCCCAAGGTCGCCTTCTTCACGGTGGGA 45903
Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGAT 146156
|| ||| | | | ||||| | || | ||| || || | ||||| ||
Sbjct 45902 AAGGCCGACGCTGTCGAGGTATTCTCTGGATCCATTACCATCCCAAAT 45855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590062453757800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |