Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq411 392 3e-104
seq680 221 1e-52
seq455 93.3 4e-14
seq530 86.0 6e-12
>seq411
Length=240905
Score = 392 bits (434), Expect = 3e-104
Identities = 1151/1746 (66%), Gaps = 44/1746 (3%)
Strand=Plus/Minus
Query 22256 TGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGAC--ATTT 22313
|||||||| || || || || || |||||||| || | |||||| || ||| ||||
Sbjct 125410 TGATCGATGAAGGCACCGCGGTCCGCGGCCAT-TTGAACAATGTT-GCGCTGACTGATTT 125353
Query 22314 CCCATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCG--ATCCTCTGGAC 22371
|||| || |||||||||| | ||| || ||| || |||| || | || ||
Sbjct 125352 CCCAGACAGTCTTGTACAACGCCTTGAGGTCGTCCGGAATG--TTCGGAATGCGTTGCAC 125295
Query 22372 GGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGT 22431
||| ||| | | ||||| || || || | || |||||| || | ||
Sbjct 125294 GGAACCGCCGTCGGCGATGATGCGGTTCTTCATGTTCTCAGACCACAATCCACGGTCGAC 125235
Query 22432 CAAATCTTTGACCAG--ATGACGGTTCACCACTTGAAACTCGCCGGACAAG-ACGCGGCG 22488
| ||| || | || ||| |||| || ||||| || || |||| |||| || || ||
Sbjct 125234 GAGATCCTTCAGCAACCATG--GGTTGACGACTTGGAATTCTCCGG-CAAGCACACGACG 125178
Query 22489 TTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGT 22548
||| |||||| ||| | || ||||| | || ||| |||| ||||| | ||
Sbjct 125177 AGAGTAGATGTTGCTAGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGCGATGT 125118
Query 22549 CGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTT 22608
|| || || ||||| || || | ||| || ||||| | | ||||||| | || ||
Sbjct 125117 GGAGGCAGTAGGCATTGGTGCAACCAGAAGGGAGTTGCGGACACCGTGCTGAGCGATCTT 125058
Query 22609 ACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTA 22668
||||||| ||||||||| || || || || || || | ||||||| |||||
Sbjct 125057 GGCCTTGAGCGCGTCCCAGTCCCAGAGGTCTGAAGGTGTGAC---GCCCCACATCTCGTA 125001
Query 22669 TTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGC 22728
|| | |||| ||||| ||| |||||||| ||||| |||||| | | ||
Sbjct 125000 CTGAAGTTCGCCCTTTGAAACCGGGGAGCCCTCGTACGTCTCGTATGGACCA-AGCTTGC 124942
Query 22729 G-GCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGT 22787
||||| ||||| || | ||| ||| || || ||||||||||| | ||
Sbjct 124941 TAGCAAGGTCGCACGATGCGGTGAGCGCAGCGTGGTAGATGGTCTCGAAGATCTGGACGT 124882
Query 22788 TCAATTCGGCGGC----GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCC 22843
||| | ||| || ||| || | ||||| || | || ||| || ||
Sbjct 124881 TCAGGTGACGGGCCTCTGGAGAC----TCAAAAGGCATGCGTAGAGCCAGGAAAGCATCA 124826
Query 22844 GCCATACC-CTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTC 22902
|| | ||| |||| | || | |||||| |||| || || || | || |||||
Sbjct 124825 GCAAGACCGCTGA-CACCGAGACCGATTGGTCTGTGGCGCATGTTGCTCTTCTTCGCCTC 124767
Query 22903 GGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGT 22962
|||| || || || ||||| | |||||||||| |||| || | || |
Sbjct 124766 AGGCACTGGGTAGTGGTTGACTTCGATGATCTTGTTCAAGTTCTTGGTGACGACTTGCAC 124707
Query 22963 TATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTGTACAACAA--ACTT--GTTGA 23018
| ||||||||| |||||| || || | ||| | || | ||||
Sbjct 124706 AACCTCGTGGAGCTTCTCAAAGTCG-AAACGCTCG-TTCT-CAAGATCGACGTAGGTTGG 124650
Query 23019 CGGCGATCGAG--GCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAAT 23076
| | | ||| ||||| ||||| ||||| ||||||||| | |||||||| | ||
Sbjct 124649 CAGAGCAAGAGATGCAAGGTTGCACACGGCGACCTCGTCTGGTGCGGTGTACTCAATGAT 124590
Query 23077 TTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATT 23136
|| || || | ||| || ||| ||||| || | || |||||||||| || || ||
Sbjct 124589 CTCAGTGCACAAGTTGGAACTCTTGATCGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTT 124530
Query 23137 GCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGC 23196
| | |||||||||||||||| | || || ||||| ||| | || | ||| ||
Sbjct 124529 GGCAGCATCCTTGTAGAGCATGAAAGGTCCACCAGTCTCAGTCTGGGCTTCCAAGATAGC 124470
Query 23197 TCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTT 23255
||| | | |||||| | ||| ||| ||||| | | |||||| ||||||
Sbjct 124469 ATACCAGACCTTTTGAGCGCGGACA-GTCTCACGTCCACGACCTTCTCTCTCGTAGCGGG 124411
Query 23256 GGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGA 23314
||||| | | || || ||| ||||||| ||| || || || || || | | | ||
Sbjct 124410 TGTACAGCTCCTCGAACTCGTCACCGTACACA-TCAGCGAGACCAGGGCACTCATTGGGG 124352
Query 23315 CACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCAT 23374
|||||||| |||| || || ||| || || |||| || ||||| || |||||
Sbjct 124351 CACATGAGTGTCCATTCTGCGTTGGCTTCGACACGCTTCATGAACAGATCTGGGATCCAA 124292
Query 23375 AGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCC 23434
|||||| ||||||| || || || ||||| ||||| || ||| |||||| | |||
Sbjct 124291 AGAGCGAAGAACAGATCACGTGCACGCACTTCCTCCTTTCCGTGGTTCTTGCGGAGGTCC 124232
Query 23435 AAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTC 23494
| ||| | || || || ||||| ||||| ||||| | ||| |||||||| || | |
Sbjct 124231 ATGAAGGAGATGACATCTGCGTGCCATGGCTCTAGGTAGATGGCGAACGCGCCAGGACGC 124172
Query 23495 TTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACG 23554
|| ||||| || || ||||| || ||||| ||||| ||||| || | | |||||| | |
Sbjct 124171 TTGTTGCCACCTTGGTCGACATAGCGGGCAGTGTTATTGTAGACGCGCAACATCGGGATG 124112
Query 23555 AGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGA 23614
||||| ||||| | |||| | ||| || | || || | || || | |||||
Sbjct 124111 AGACCATTGGATGTGCCGTTTGTGCCTGCAATGTATGATCCAGTAGCACGGATCTTGTGG 124052
Query 23615 ACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCG 23674
|| | || || || || | ||||| ||||| ||||| ||||| ||||||
Sbjct 124051 CAGTTCAGGCCAATACCACCAGCATTCTTCGAGATCATGGCGCAAGTCTTCAGTGTGTCG 123992
Query 23675 TAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCT 23734
||||| ||||| |||||||| || || | ||| |||||| || |||| || || ||
Sbjct 123991 TAGATACCCTCAATGCTGTCATCCTTCATGTCGATCAAGAAGCATGAAGCCAACTGTGCA 123932
Query 23735 TTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT- 23793
|| |||||| | || ||||||||| || ||||| || |||||| ||||||||
Sbjct 123931 TTCGGCGTACCAGCGCTGAACAGTGTAGGCGAAGCGTGTGTGAAGTATTTGTTCGACATG 123872
Query 23794 TAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCG 23853
||| ||||| || || |||||||| || || || || ||||| || || | || || ||
Sbjct 123871 TAG-TTGTAGGTCTCAATGGCGGCCTCGATATCGTCGCCGTGGATTCCAACAGCCACACG 123813
Query 23854 CATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACG 23913
||| ||||||| || ||||||||| | ||| | ||| || || ||||| ||
Sbjct 123812 CATGATCATGTGCTGTGGTCTCTCGGCAACTTTGCCATCAATGCGGAGCAAGTATGAGCG 123753
Query 23914 TTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973
|| || ||| || || ||||| || | ||||| || || | || | || ||||| ||
Sbjct 123752 TTCCAGCGTCTTGAAACCAAAGTATTGGTAGTTGAAATCTCTGTCATAGACAATGGCAGA 123693
Query 23974 ATTCAA 23979
|||||
Sbjct 123692 GTTCAA 123687
>seq680
Length=821847
Score = 221 bits (244), Expect = 1e-52
Identities = 578/871 (66%), Gaps = 23/871 (3%)
Strand=Plus/Plus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| |||||||||||||| ||||| || ||||| || ||||| | |||||| | || |||
Sbjct 340306 ATATGGAACATGTACAAGAAGGCCGAGGCATCATTCTGGACTGCCGAAGAGATTGATCTG 340365
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686
|| |||||||| ||| ||| | | |||| || ||| | || || |
Sbjct 340366 TCCAAGGATCTCCACGACTGGAACAAGCGACTCAATGACGACGAGCGCTTCTTCATCTCA 340425
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
||||| | || || |||||||||||||| || ||||| |||||||| ||||||| ||
Sbjct 340426 CACGTCCTTGCATTCTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTGGTCGAGCGA 340485
Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|| || |||||| | ||||||| ||||||| ||||| || || | ||
Sbjct 340486 TTCAGCGCCGAGGTGCAAATACCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 340545
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866
|| ||| | || || || | || || || |||||||| || ||| | | || | |
Sbjct 340546 GAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCGAGCCCAAG 340605
Query 57867 GAGA-AACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGA 57925
|| ||| || || |||||||| ||||| | || || ||| || ||||| ||
Sbjct 340606 CAGCGAACATAC-CTCTTCAACGCCATCGACAACATCCCTTGTATCCGCAGAAAGGCTGA 340664
Query 57926 GTGGTCAATCAAATGGATAAAAAGCGCCACGGCC---ACGTTCGCCGAGAGGCTAATCGC 57982
||| || | |||||| | || || | || ||||| | | | |||||
Sbjct 340665 CTGGGCACTGCGATGGATCTCG---GACAAGGACTCTACTTTCGCTATGCGATTGATCGC 340721
Query 57983 GTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAA 58042
|| || || ||||| ||||| ||||| || ||| || ||| | || || ||| ||||
Sbjct 340722 CTTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTCGCGTCCATCTTCTGGTTGAA 340781
Query 58043 GAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGG 58102
||| || || || ||| | ||||| || || ||||||| | || || || ||||||||
Sbjct 340782 GAAGCGTGGTCTCATGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGG 340841
Query 58103 TCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGA 58162
| || ||||| || || ||||| ||| ||||||| | || || || |||
Sbjct 340842 CATGCACACTGACTTCGCTTGCCTGCTGTTCTCTCACCTCAAGAACAAGCC--CGCCAAG 340899
Query 58163 TCGCATCTTGGACATTATCACCG---AGGCGGTCGCGATCGAAAATGAGTTTGTCACCGA 58219
||| || || | | |||| || |||| || || || || | || || | |||||
Sbjct 340900 TCGG-TCGTGCAAAGCATCATCGTGGAGGCCGTTGCCATTGAGCAAGAATTCTTGACCGA 340958
Query 58220 AGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTT 58279
|| || || || ||||||| |||||| | | | |||| |||||||||||||
Sbjct 340959 TGCTCTGCCTTGCGCGCTGCTCGGCATGAACGCTAAGCTCATGTGCCAGTACATTGAGTT 341018
Query 58280 TGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCA---TTACAACACGAAAAA 58336
||| || ||| |||| |||||| || |||| | | | |||||| | | ||
Sbjct 341019 TGTCGCTGACCGACTGCTGCTCG--CT-CTTGGCAACCAAAAGTTCTACAACGCCACCAA 341075
Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaa 58396
|| || || || ||| | ||||| |||| |||||||| ||||| ||||| ||
Sbjct 341076 CCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAAGCG 341135
Query 58397 aGTTAGCGAATATCAAAAATACGGCGTGATG 58427
||| |||| || || || ||| || |||
Sbjct 341136 TGTTGGCGACTACCAGAAGGCCGGTGTCATG 341166
>seq455
Length=1194790
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || || || || |
Sbjct 1130987 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGAGC 1130928
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| | ||||| | || |||||||| ||| | || || ||||||
Sbjct 1130927 GACACTATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAG 1130868
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| | || ||||| ||||| || | |||||| ||| | || || |||
Sbjct 1130867 CAGCGCTTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCTCGGACTACAAC 1130808
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| ||||||||||| || |||| ||| | || | || ||||
Sbjct 1130807 ATCCAAAAGGAATCGACTCTCCACTTGGTGCTTCGTCTACGAGGTGGTA 1130759
Score = 87.8 bits (96), Expect = 2e-12
Identities = 116/158 (73%), Gaps = 6/158 (4%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| || |||||||| ||||| || | || || ||| | ||
Sbjct 1130759 ATGCAAATCTTCGTCAAGACACTCACAGGCAAGACGATTACGTTGGAGGTAGAATCATCG 1130700
Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGCG--GACAAGGAAGGCGTGCCGCCCGAC 31309
|||| |||| | || || ||| || | | |||||||| || | || || |||
Sbjct 1130699 GACACCATCGACAACGTGAA---GAGCAAGATCCAAGACAAGGAGGGTATCCCACCGGAC 1130643
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||||| || || ||||| ||||| |||||||| ||
Sbjct 1130642 CAGCAGCGCCTGATCTTCGCGGGCAAGCAGTTGGAGGA 1130605
Score = 86.0 bits (94), Expect = 6e-12
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 31215 TGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAAC 31274
|||| ||||| || |||||| |||| || || | ||||| |||| | |||||
Sbjct 1131193 TGACCGGCAAGACTATCACCCTCGAGGTGGAGTCTAGCGACACCATCGACAACGTCAAGT 1131134
Query 31275 AGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCA 31334
|| || ||||||||| ||| | || || |||||||||||||| || ||||||||||
Sbjct 1131133 CGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGTCTCATTTTCGCTGGCA 1131074
Query 31335 AACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTC 31394
| || | || ||| || || |||||| ||||| || || || || || || |
Sbjct 1131073 AGCAACTCGAGGACGGCCGTACCCTGTCCGATTACAACATCCAGAAGGAGTCCACCCTCC 1131014
Query 31395 ATCTGGTACT 31404
|||| || ||
Sbjct 1131013 ATCTCGTCCT 1131004
>seq530
Length=291
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || || || || |
Sbjct 265 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGAGC 206
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| | ||||| | || |||||||| ||| | || || ||||||
Sbjct 205 GACACTATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAG 146
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||| || || ||||| ||||| |||||||| ||
Sbjct 145 CAGCGCCTGATCTTCGCGGGCAAGCAGTTGGAGGA 111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445755562304400
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